Search results: The pahtway p4539 has 570 genes in the original annotation. Currently, there are 339 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
79723SUV39H2KMT1Bsuppressor of variegation 3-9 homolog 210p13DMG:Jaffe_2016Chromatin Remodeling Genes
55388MCM10CNA43 | DNA43 | PRO2249minichromosome maintenance 10 replication initiation factor10p13CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
57559STAMBPL1ALMalpha | AMSH-FP | AMSH-LP | bA399O19.2STAM binding protein like 110q23.31DMG:Jaffe_2016
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
23223RRP12KIAA0690ribosomal RNA processing 12 homolog10q24.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
118980SFXN2-sideroflexin 210q24.32CV:PGCnp
LK:YES
340719NANOS1EC_Rep1a | NOS-1 | NOS1 | SPGF12nanos homolog 1 (Drosophila)10q26.11CV:PGCnp
DMG:Nishioka_2013
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
9793CKAP5CHTOG | MSPS | TOG | TOGp | ch-TOGcytoskeleton associated protein 511p11.2CV:PGCnp
CV:PheWAS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
81930KIF18AMS-KIF18A | PPP1R99kinesin family member 18A11p14.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
7003TEAD1AA | NTEF-1 | REF1 | TCF-13 | TCF13 | TEAD-1 | TEF-1TEA domain transcription factor 111p15.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
79073TMEM109-transmembrane protein 10911q12.2DMG:vanEijk_2014
3619INCENP-inner centromere protein11q12.3CV:PGCnp
DMG:Wockner_2014
7536SF1BBP | D11S636 | MBBP | ZCCHC25 | ZFM1 | ZNF162splicing factor 111q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3177SLC29A2DER12 | ENT2 | HNP36solute carrier family 29 member 211q13CV:PGCnp
23649POLA2-polymerase (DNA) alpha 2, accessory subunit11q13.1CV:PGCnp
DMG:Jaffe_2016
10714POLD3P66 | P68 | PPP1R128polymerase (DNA) delta 3, accessory subunit11q14CV:PGCnp
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1663DDX11CHL1 | CHLR1 | KRG2 | WABSDEAD/H-box helicase 1112p11CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
51026GOLT1BCGI-141 | GCT2 | GOT1 | GOT1B | YMR292Wgolgi transport 1B12p12.1CV:PGCnp
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
84318CCDC77-coiled-coil domain containing 7712p13.33CV:PGCnp
DMG:Jaffe_2016
9700ESPL1ESP1 | SEPAextra spindle pole bodies like 1, separase12qCV:PGCnp
GO_Annotation
Ascano FMRP targets
144402CPNE8-copine 812q12CV:PGCnp
DMG:Nishioka_2013
Expression
8086AAASAAA | AAASb | ADRACALA | ADRACALIN | ALADIN | GL003aladin WD repeat nucleoporin12q13CV:PGCnp
DMG:Nishioka_2013
2065ERBB3ErbB-3 | HER3 | LCCS2 | MDA-BF-1 | c-erbB-3 | c-erbB3 | erbB3-S | p180-ErbB3 | p45-sErbB3 | p85-sErbB3erb-b2 receptor tyrosine kinase 312q13Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
91010FMNL3FHOD3 | FRL2 | WBP-3 | WBP3formin like 312q13.12CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
5074PAWRPAR4 | Par-4pro-apoptotic WT1 regulator12q21Association
CV:PGCnp
PMID:cooccur
8549LGR5FEX | GPR49 | GPR67 | GRP49 | HG38leucine-rich repeat containing G protein-coupled receptor 512q21.1CV:PGCnp
DMG:Wockner_2014
Expression
1466CSRP2CRP2 | LMO5 | SmLIMcysteine and glycine rich protein 212q21.1CV:PGCnp
DMG:Wockner_2014
144455E2F7-E2F transcription factor 712q21.2CV:PGCnp
DMG:Wockner_2014
282809POC1BCORD20 | PIX1 | TUWD12 | WDR51BPOC1 centriolar protein B12q21.33CV:PGCnp
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
283431GAS2L3G2L3growth arrest specific 2 like 312q23.1CV:PGCnp
DMG:Nishioka_2013
79023NUP37p37nucleoporin 37kDa12q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
11113CITCRIK | STK21citron rho-interacting serine/threonine kinase12q24CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9733SART3DSAP1 | P100 | RP11-13G14 | TIP110 | p110 | p110(nrb)squamous cell carcinoma antigen recognized by T-cells 312q24.1CV:PGCnpAscano FMRP targets
54997TESCCHP3 | TSCtescalcin12q24.22CV:PGCnp
PMID:cooccur
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
9761MLECKIAA0152malectin12q24.31CV:PGCnp
DMG:Jaffe_2016
65117RSRC2-arginine/serine-rich coiled-coil 212q24.31CV:PGCnp
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
26586CKAP2LB1 | TMAP | se20-10cytoskeleton associated protein 213q14CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
79866BORAC13orf34bora, aurora kinase A activator13q22.1CV:PGCnp
PMID:cooccur
10082GPC6OMIMD1glypican 613q32CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
54930HAUS4C14orf94HAUS augmin like complex subunit 414q11.2CV:PGCnp
GSMA_I
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
122769LRR14-1BBLRR | LRR-1 | PPIL5leucine rich repeat protein 114q21.3CV:PGCnp
55172DNAAF2C14orf104 | CILD10 | KTU | PF13dynein (axonemal) assembly factor 214q21.3CV:PGCnp
Expression
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
8812CCNKCPR4cyclin K14q32CV:PGCnp
DMG:Jaffe_2016
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
115708TRMT61AC14orf172 | GCD14 | Gcd14p | TRM61 | hTRM61tRNA methyltransferase 61A14q32CV:PGCnp
283643C14orf80-chromosome 14 open reading frame 8014q32.33CV:PGCnp
55038CDCA4HEPP | SEI-3/HEPPcell division cycle associated 414q32.33DMG:Wockner_2014
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
254531LPCAT4AGPAT7 | AYTL3 | LPAAT-eta | LPEAT2lysophosphatidylcholine acyltransferase 415q14CV:PGCnp
DMG:vanEijk_2014
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
11339OIP55730547N13Rik | CT86 | LINT-25 | MIS18B | MIS18beta | hMIS18betaOpa interacting protein 515q15.1CV:PGCnp
DNM:Fromer_2014
79968WDR76CDW14WD repeat domain 7615q15.3CV:PGCnp
Expression
51496CTDSPL2HSPC058 | HSPC129CTD small phosphatase like 215q15.3-q21.1CV:PGCnp
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
22995CEP152MCPH4 | MCPH9 | SCKL5centrosomal protein 152kDa15q21.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
84888SPPL2AIMP3 | PSL2signal peptide peptidase like 2A15q21.2CV:PGCnp
PMID:cooccur
55329MNS1SPATA40meiosis specific nuclear structural 115q21.3CV:PGCnp
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
302ANXA2ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IVannexin A215q22.2CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
79856SNX22-sorting nexin 2215q22.31CV:PGCnp
DMG:Wockner_2014
Expression
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
641BLMBS | RECQ2 | RECQL2 | RECQL3Bloom syndrome RecQ like helicase15q26.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
64782AENISG20L1 | pp12744apoptosis enhancing nuclease15q26.1CV:PGCnp
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
22856CHSY1CHSY | CSS1 | ChSy-1 | TPBSchondroitin sulfate synthase 115q26.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
8479HIRIP3-HIRA interacting protein 316p11.2CNV:YES
CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
3835KIF22A-328A3.2 | KID | KNSL4 | OBP | OBP-1 | OBP-2 | SEMDJL2kinesin family member 2216p11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
79728PALB2FANCN | PNCA3partner and localizer of BRCA216p12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
112479ERI2EXOD1 | ZGRF5ERI1 exoribonuclease family member 216p12.3CV:PGCnp
GSMA_IIE
84331FAM195AC16orf14 | c349E10.1family with sequence similarity 195 member A16p13.3CV:PGCnp
197335WDR90C16orf15 | C16orf16 | C16orf17 | C16orf18 | C16orf19WD repeat domain 9016p13.3CV:PGCnp
PMID:cooccur
57407NMRAL1HSCARG | SDR48A1NmrA-like family domain containing 116p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
80178C16orf59-chromosome 16 open reading frame 5916p13.3CV:PGCnp
PMID:cooccur
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
10273STUB1CHIP | HSPABP2 | NY-CO-7 | SCAR16 | SDCCAG7 | UBOX1STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase16p13.3NetworkG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
79801SHCBP1PALSHC SH2-domain binding protein 116q11.2CV:PGCnp
GSMA_IIE
81577GFOD2-glucose-fructose oxidoreductase domain containing 216q22.1CV:PGCnp
6553SLC9A5NHE5solute carrier family 9 member A516q22.1CV:PGCnp
80152CENPTC16orf56 | CENP-Tcentromere protein T16q22.1CV:PGCnp
51659GINS2HSPC037 | PSF2 | Pfs2GINS complex subunit 2 (Psf2 homolog)16q24.1CV:PGCnp
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
2175FANCAFA | FA-H | FA1 | FAA | FACA | FAH | FANCHFanconi anemia complementation group A16q24.3CV:PGCnp
6470SHMT1CSHMT | SHMTserine hydroxymethyltransferase 1 (soluble)17p11.2CV:PGCnp
PMID:cooccur
359845FAM101BCFM1family with sequence similarity 101 member B17p13CV:GWASdb
CV:PGCnp
5430POLR2APOLR2 | POLRA | RPB1 | RPBh1 | RPO2 | RPOL2 | RpIILS | hRPB220 | hsRPB1polymerase (RNA) II subunit A17p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
80169CTC1AAF-132 | AAF132 | C17orf68 | CRMCC | tmp494178CTS telomere maintenance complex component 117p13.1CV:PGCnp
54478FAM64ACATS | RCS1family with sequence similarity 64 member A17p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
3927LASP1Lasp-1 | MLN50LIM and SH3 protein 117q11-q21.3CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
79915ATAD5C17orf41 | ELG1 | FRAG1ATPase family, AAA domain containing 517q11.2CV:PGCnp
Expression
26284ERAL1CEGA | ERA | ERA-W | ERAL1A | H-ERA | HERA-A | HERA-BEra-like 12S mitochondrial rRNA chaperone 117q11.2CV:PGCnp
DMG:Jaffe_2016
54475NLE1Nlenotchless homolog 1 (Drosophila)17q12CV:PGCnp
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
78995C17orf53-chromosome 17 open reading frame 5317q21.31CV:PGCnp
DMG:Jaffe_2016
3690ITGB3BDPLT16 | BDPLT2 | CD61 | GP3A | GPIIIa | GTintegrin subunit beta 317q21.32CV:PGCnp
Network
PMID:cooccur
55771PRR11-proline rich 1117q22CV:PGCnp
Expression
348235SKA2FAM33Aspindle and kinetochore associated complex subunit 217q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10238DCAF7AN11 | HAN11 | SWAN-1 | WDR68DDB1 and CUL4 associated factor 717q23.3CV:PGCnp
DMG:Wockner_2014
27092CACNG4-calcium voltage-gated channel auxiliary subunit gamma 417q24CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
CompositeSet
Potential synaptic genes
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
79902NUP85FROUNT | Nup75nucleoporin 85kDa17q25.1CV:PGCnp
DMG:Jaffe_2016
3613IMPA2-inositol(myo)-1(or 4)-monophosphatase 218p11.2Association
CV:PGCnp
CV:PheWAS
PMID:cooccur
9229DLGAP1DAP-1 | DAP-1-ALPHA | DAP-1-BETA | DAP1 | DLGAP1A | DLGAP1B | GKAP | SAPAP1discs large homolog associated protein 118p11.31CV:PGCnp
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9663LPIN2-lipin 218p11.31CV:PGCnp
CV:PheWAS
CompositeSet
Darnell FMRP targets
6093ROCK1P160ROCK | ROCK-IRho associated coiled-coil containing protein kinase 118q11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
220134SKA1C18orf24spindle and kinetochore associated complex subunit 118q21.1CV:PGCnp
DMG:Wockner_2014
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
93323HAUS8DGT4 | HICE1 | NY-SAR-48HAUS augmin like complex subunit 819p13.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
55723ASF1BCIA-IIanti-silencing function 1B histone chaperone19p13.12DMG:Jaffe_2016Chromatin Remodeling Genes
3949LDLRFH | FHC | LDLCQ2low density lipoprotein receptor19p13.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
170961ANKRD24-ankyrin repeat domain 2419p13.3CV:PGCnp
DMG:Wockner_2014
29128UHRF1ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95ubiquitin like with PHD and ring finger domains 119p13.3CV:PGCnp
DMG:Wockner_2014
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
5050PAFAH1B3PAFAHGplatelet activating factor acetylhydrolase 1b catalytic subunit 319q13.1GO_Annotation
PMID:cooccur
7515XRCC1RCCX-ray repair complementing defective repair in Chinese hamster cells 119q13.2Association
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5424POLD1CDC2 | CRCS10 | MDPL | POLDpolymerase (DNA) delta 1, catalytic subunit19q13.3CV:PGCnp
DMG:Wockner_2014
Expression
23211ZC3H4C19orf7zinc finger CCCH-type containing 419q13.32CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
53635PTOV1ACID2 | PTOV-1prostate tumor overexpressed 119q13.33CV:PGCnp
DMG:vanEijk_2014
126133ALDH16A1-aldehyde dehydrogenase 16 family member A119q13.33CV:PGCnp
DNM:Fromer_2014
CompositeSet
5178PEG3PW1 | ZKSCAN22 | ZNF904 | ZSCAN24paternally expressed 319q13.4CV:PGCnpCompositeSet
Darnell FMRP targets
11218DDX20DP103 | GEMIN3DEAD-box helicase 201p21.1-p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Guipponi_2014
GSMA_I
163786SASS6MCPH14 | SAS-6 | SAS6SAS-6 centriolar assembly protein1p21.2CV:PGCnp
DMG:Jaffe_2016
51375SNX7-sorting nexin 71p21.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23576DDAH1DDAH | HEL-S-16dimethylarginine dimethylaminohydrolase 11p22CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
NEUROTRANSMITTER METABOLISM
CompositeSet
55635DEPDC1DEP.8 | DEPDC1-V2 | DEPDC1A | SDP35DEP domain containing 11p31.2CV:PGCnp
DMG:Nishioka_2013
Expression
GSMA_IIA
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
6886TAL1SCL | TCL5 | bHLHa17 | tal-1T-cell acute lymphocytic leukemia 11p32CV:PGCnp
PMID:cooccur
3716JAK1JAK1A | JAK1B | JTK3Janus kinase 11p32.3-p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
63967CLSPN-claspin1p34.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
6118RPA2REPA2 | RP-A p32 | RP-A p34 | RPA32replication protein A21p35CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1870E2F2E2F-2E2F transcription factor 21p36CV:GWASdb
DMG:Wockner_2014
6723SRMPAPT | SPDSY | SPS1 | SRML1spermidine synthase1p36-p22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1104RCC1CHC1 | RCC1-I | SNHG3-RCC1regulator of chromosome condensation 11p36.1CV:PGCnp
DMG:Jaffe_2016
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
378708APITD1CENP-S | CENPS | FAAP16 | MHF1apoptosis-inducing, TAF9-like domain 11p36.22CV:PGCnp
DMG:Wockner_2014
54991C1orf159-chromosome 1 open reading frame 1591p36.33CV:PGCnp
DMG:Wockner_2014
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
51177PLEKHO1CKIP-1 | CKIP1 | JBP | OC120pleckstrin homology domain containing O11q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
54865GPATCH4GPATC4G-patch domain containing 41q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10763NESNbla00170nestin1q23.1CV:PGCnp
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
259266ASPMASP | Calmbp1 | MCPH5abnormal spindle microtubule assembly1q31CV:PGCnp
GO_Annotation
PMID:cooccur
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
23380SRGAP2ARHGAP34 | FNBP2 | SRGAP2A | SRGAP3SLIT-ROBO Rho GTPase activating protein 21q32.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
56256SERTAD4DJ667H12.2SERTA domain containing 41q32.1-q41CV:PGCnp
DMG:Wockner_2014
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
64853AIDAC1orf80axin interactor, dorsalization associated1q41CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
PMID:cooccur
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
84515MCM8C20orf154 | POF10 | dJ967N21.5minichromosome maintenance 8 homologous recombination repair factor20p12.3CV:PGCnp
CV:PheWAS
25939SAMHD1CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88SAM domain and HD domain 120pter-q12CV:PGCnp
DMG:Jaffe_2016
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
60436TGIF2-TGFB induced factor homeobox 220q11.23CV:PGCnp
DMG:Wockner_2014
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
6874TAF4TAF2C | TAF2C1 | TAF4A | TAFII130 | TAFII135TATA-box binding protein associated factor 420q13.33CV:PGCnp
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
874CBR3HEL-S-25 | SDR21C2 | hCBR3carbonyl reductase 321q22.2CV:PGCnpCompositeSet
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
7290HIRADGCR1 | TUP1 | TUPLE1histone cell cycle regulator22q11.21CNV:YES
CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
8318CDC45CDC45L | CDC45L2 | PORC-PI-1cell division cycle 4522q11.21CNV:YES
CV:PGCnp
GSMA_I
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
5905RANGAP1Fug1 | RANGAP | SDRan GTPase activating protein 122q13CV:PGCnp
PMID:cooccur
79019CENPMC22orf18 | CENP-M | PANE1centromere protein M22q13.2CV:PGC128
CV:PGCnp
83746L3MBTL2H-l(3)mbt-l | L3MBTl(3)mbt-like 2 (Drosophila)22q13.31-q13.33CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
29781NCAPH2CAPH2non-SMC condensin II complex subunit H222q13.33CV:PGCnpAscano FMRP targets
84913ATOH8HATH6 | bHLHa21atonal bHLH transcription factor 82p11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
56603CYP26B1CYP26A2 | P450RAI-2 | P450RAI2 | RHFCAcytochrome P450 family 26 subfamily B member 12p13.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
54465ETAA1ETAA16Ewing tumor-associated antigen 12p14CV:PGCnp
DMG:Jaffe_2016
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
79833GEMIN6-gem nuclear organelle associated protein 62p22.1CV:PGCnp
DMG:Nishioka_2013
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
150468CKAP2L-cytoskeleton associated protein 2 like2q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
205251LINC00116NCRNA00116long intergenic non-protein coding RNA 1162q13CV:PGCnp
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
84083ZRANB34933425L19Rik | AH2zinc finger RANBP2-type containing 32q21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
51776ZAKAZK | MLK7 | MLT | MLTK | MRK | mlklak | pksterile alpha motif and leucine zipper containing kinase AZK2q24.2CV:PGCnp
55137FIGN-fidgetin2q24.3CV:PGCnp
GSMA_IIA
PMID:cooccur
83879CDCA7JPO1cell division cycle associated 72q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
9262STK17BDRAK2serine/threonine kinase 17b2q32.3CV:PGCnp
26010SPATS2LDNAPTP6 | SGNPspermatogenesis associated serine rich 2 like2q33.1CV:GWASdb
CV:PGCnp
LK:YES
151246SGOL2SGO2 | TRIPINshugoshin-like 2 (S. pombe)2q33.1CV:PGCnp
Network
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5270SERPINE2GDN | GDNPF | PI-7 | PI7 | PN-1 | PN1 | PNIserpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 22q36.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
G2Cdb.humanPSP
4691NCLC23nucleolin2q37.1CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
9759HDAC4AHO3 | BDMR | HA6116 | HD4 | HDAC-4 | HDAC-A | HDACAhistone deacetylase 42q37.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
23024PDZRN3LNX3 | SEMACAP3 | SEMCAP3PDZ domain containing ring finger 33p13CV:PGCnp
DNM:Ambalavanan_2016
GSMA_IIA
GSMA_IIE
55164SHQ1GRIM-1 | Shq1pSHQ1, H/ACA ribonucleoprotein assembly factor3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
64943NT5DC2-5'-nucleotidase domain containing 23p21.1CV:PGCnp
LK:YES
7866IFRD2IFNRP | SKMc15 | SM15interferon-related developmental regulator 23p21.3CV:PGCnp
DMG:Wockner_2014
10293TRAIPRNF206 | SCKL9 | TRIPTRAF interacting protein3p21.31CV:PGCnp
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
132001TAMM41C3orf31 | RAM41 | TAM41TAM41 mitochondrial translocator assembly and maintenance homolog3p25.2CV:PGCnp
GSMA_I
7372UMPSOPRTuridine monophosphate synthetase3q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2596GAP43B-50 | PP46growth associated protein 433q13.31CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
8971H1FXH1.10 | H1XH1 histone family member X3q21.3CV:PGCnp
DMG:Nishioka_2013
10274STAG1SA1 | SCC3Astromal antigen 13q22.3CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
22998LIMCH1LIMCH1A | LMO7BLIM and calponin homology domains 14p13CV:GWASdb
CV:PGCnp
64151NCAPGCAPG | CHCG | NY-MEL-3 | YCG1non-SMC condensin I complex subunit G4p15.33CV:PGCnpAscano FMRP targets
55646LYARZC2HC2 | ZLYARLy1 antibody reactive4p16.3CV:PGCnp
2261FGFR3ACH | CD333 | CEK2 | HSFGFR3EX | JTK4fibroblast growth factor receptor 34p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
53371NUP54-nucleoporin 54kDa4q21.1DNM:Xu_2012CompositeSet
132660LIN54CXCDC1 | JC8.6 | MIP120 | TCX1lin-54 DREAM MuvB core complex component4q21.22CV:PGCnp
DMG:Jaffe_2016
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
23022PALLDCGI-151 | CGI151 | MYN | PNCA1 | SIH002palladin, cytoskeletal associated protein4q32.3CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
83891SNX25MSTP043 | SBBI31sorting nexin 254q35.1CV:PGCnp
DMG:vanEijk_2014
1635DCTD-dCMP deaminase4q35.1CV:GWASdb
CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
6507SLC1A3EA6 | EAAT1 | GLAST | GLAST1solute carrier family 1 member 35p13CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
85409NKD2Naked2naked cuticle homolog 2 (Drosophila)5p15.3CV:PGCnp
DMG:Wockner_2014
55789DEPDC1BBRCC3 | XTP1DEP domain containing 1B5q12.1CV:PGCnp
4208MEF2CC5DELq14.3 | DEL5q14.3myocyte enhancer factor 2C5q14.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
9782MATR3ALS21 | MPD2 | VCPDMmatrin 35q31.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
Network
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
133522PPARGC1BERRL1 | PERC | PGC-1(beta) | PGC1BPPARG coactivator 1 beta5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
51149C5orf45-chromosome 5 open reading frame 455q35.3CV:PGCnp
DMG:Wockner_2014
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
6941TCF19SC1 | TCF-19transcription factor 196p21.3CV:PGCnp
GSMA_I
5252PHF1MTF2L2 | PCL1 | PHF2 | TDRD19C | hPHF1PHD finger protein 16p21.3CV:PGCnp
GSMA_I
7407VARSG7A | VARS1 | VARS2valyl-tRNA synthetase6p21.3CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
9656MDC1NFBD1mediator of DNA damage checkpoint 16p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
57819LSM2C6orf28 | G7B | YBL026W | snRNPLSM2 homolog, U6 small nuclear RNA and mRNA degradation associated6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
30834ZNRD1HTEX-6 | HTEX6 | Rpa12 | TCTEX6 | TEX6 | ZR14 | hZR14 | tctex-6zinc ribbon domain containing 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
1192CLIC1G6 | NCC27chloride intracellular channel 16p21.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
Network
2794GNL1HSR1G protein nucleolar 1 (putative)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
CompositeSet
23294ANKS1AANKS1ankyrin repeat and sterile alpha motif domain containing 1A6p21.31CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
Ascano FMRP targets
221527ZBTB12Bat9 | C6orf46 | D6S59E | G10 | NG35zinc finger and BTB domain containing 126p21.33CV:PGCnp
GSMA_I
51567TDP2AD022 | EAP2 | EAPII | TTRAP | dJ30M3.3 | hTDP2tyrosyl-DNA phosphodiesterase 26p22.3-p22.1CV:PGCnp
GSMA_I
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
22881ANKRD6-ankyrin repeat domain 66q15CV:PGCnp
DMG:Wockner_2014
57673BEND3KIAA1553BEN domain containing 36q21CV:GWASdb
CV:PGCnp
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
387103CENPWC6orf173 | CENP-W | CUG2centromere protein W6q22.32CV:PGCnp
DMG:Jaffe_2016
93663ARHGAP18MacGAP | SENEX | bA307O14.2Rho GTPase activating protein 186q22.33CV:PGCnp
PMID:cooccur
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
5325PLAGL1LOT1 | ZAC | ZAC1PLAG1 like zinc finger 16q24-q25CV:PGCnp
DMG:Wockner_2014
348995NUP43bA350J20.1 | p42nucleoporin 43kDa6q25.1CV:PGCnp
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
81552VOPP1ECOP | GASPvesicular, overexpressed in cancer, prosurvival protein 17p11.2CV:PGCnp
DEG:Maycox_2009
63979FIGNL1-fidgetin like 17p12.1CV:PGCnp
DMG:Wockner_2014
5425POLD2-polymerase (DNA) delta 2, accessory subunit7p13CV:PGCnp
DMG:Wockner_2014
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
26031OSBPL3ORP-3 | ORP3 | OSBP3oxysterol binding protein like 37p15CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9586CREB5CRE-BPA | CREB-5cAMP responsive element binding protein 57p15.1CV:PGCnp
DEG:Zhao_2015
55536CDCA7LJPO2 | R1 | RAM2cell division cycle associated 7 like7p15.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
80028FBXL18Fbl18F-box and leucine-rich repeat protein 187p22.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
84310C7orf50YCR016Wchromosome 7 open reading frame 507p22.3CV:PGCnp
DMG:Wockner_2014
26608TBL2WBSCR13 | WS-betaTRPtransducin (beta)-like 27q11.23CNV:YES
DMG:Jaffe_2016
PMID:cooccur
3984LIMK1LIMK | LIMK-1LIM domain kinase 17q11.23CNV:YES
CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Network
PMID:cooccur
5982RFC2RFC40replication factor C subunit 27q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
55915LANCL2GPR69B | TASPLanC like 27q31.1-q31.33CV:PGCnp
DMG:Jaffe_2016
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5420PODXLGp200 | PC | PCLP | PCLP-1podocalyxin like7q32-q33CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
6608SMOFZD11 | Gx | SMOHsmoothened, frizzled class receptor7q32.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5764PTNHARP | HBGF8 | HBNF | NEGF1pleiotrophin7q33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Potential synaptic genes
154791C7orf55FMC1 | HSPC268chromosome 7 open reading frame 557q34CV:PGCnp
DMG:Wockner_2014
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
54892NCAPG2CAP-G2 | CAPG2 | LUZP5 | MTB | hCAP-G2non-SMC condensin II complex subunit G27q36.3CV:PGCnp
DMG:Wockner_2014
157570ESCO22410004I17Rik | EFO2 | RBSestablishment of sister chromatid cohesion N-acetyltransferase 28p21.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
80005DOCK5-dedicator of cytokinesis 58p21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
9788MTSS1MIM | MIMA | MIMBmetastasis suppressor 18p22CV:GWASdb
CV:PGCnp
GO_Annotation
6542SLC7A2ATRC2 | CAT2 | HCAT2solute carrier family 7 member 28p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
26986PABPC1PAB1 | PABP | PABP1 | PABPC2 | PABPL1poly(A) binding protein, cytoplasmic 18q22.2-q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5820PVT1LINC00079 | NCRNA00079 | onco-lncRNA-100Pvt1 oncogene (non-protein coding)8q24CV:PGCnp
DMG:Wockner_2014
7227TRPS1GC79 | LGCRtranscriptional repressor GATA binding 18q24.12CV:PGCnp
4796TONSLIKBR | NFKBIL2tonsoku-like, DNA repair protein8q24.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
1029CDKN2AARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16cyclin-dependent kinase inhibitor 2A9p21CV:PGCnp
DMG:Nishioka_2013
Network
54801HAUS6Dgt6 | FAM29AHAUS augmin like complex subunit 69p22.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
4781NFIBCTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3nuclear factor I/B9p24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
301ANXA1ANX1 | LPC1annexin A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
26147PHF19MTF2L1 | PCL3 | TDRD19BPHD finger protein 199q33.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
389792IER5LbA247A12.2immediate early response 5-like9q34.11CV:PGCnp
8241RBM10DXS8237E | GPATC9 | GPATCH9 | S1-1 | TARPS | ZRANB5RNA binding motif protein 10Xp11.23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7102TSPAN7A15 | CCG-B7 | CD231 | DXS1692E | MRX58 | MXS1 | TALLA-1 | TM4SF2 | TM4SF2btetraspanin 7Xp11.4CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
412STSARSC | ARSC1 | ASC | ES | SSDD | XLIsteroid sulfatase (microsomal), isozyme SXp22.32CV:PGCnp
Expression
PMID:cooccur