Search results: The pahtway p3477 has 543 genes in the original annotation. Currently, there are 317 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
5305PIP4K2API5P4KA | PIP5K2A | PIP5KII-alpha | PIP5KIIA | PIPKphosphatidylinositol-5-phosphate 4-kinase, type II, alpha10p12.2Association
CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
25805BAMBINMABMP and activin membrane-bound inhibitor10p12.3-p11.2CV:PGCnp
389941C1QL3C1QTNF13 | C1ql | CTRP13 | K100complement component 1, q subcomponent-like 310p13CV:PGCnp
5209PFKFB3IPFK2 | PFK2 | iPFK-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
1959EGR2AT591 | CMT1D | CMT4E | KROX20early growth response 210q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
80114BICC1BICC | CYSRDBicC family RNA binding protein 110q21.1CV:GWASdb
CV:PGCnp
3988LIPACESD | LALlipase A, lysosomal acid type10q23.2-q23.3CV:GWASdb
CV:PGCnp
53354PANK1PANKpantothenate kinase 110q23.31CV:PGCnp
8534CHST1C6ST | GST-1 | KS6ST | KSGal6ST | KSSTcarbohydrate sulfotransferase 111p11.2CV:PGCnp
5080PAX6AN | AN2 | D11S812E | FVH1 | MGDA | WAGRpaired box 611p13Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
3265HRASC-BAS/HAS | C-H-RAS | C-HA-RAS1 | CTLO | H-RASIDX | HAMSV | HRAS1 | RASH1 | p21rasHarvey rat sarcoma viral oncogene homolog11p15.5CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
64231MS4A6A4SPAN3 | 4SPAN3.2 | CD20L3 | CDA01 | MS4A6 | MST090 | MSTP090membrane spanning 4-domains A6A11q12.1CV:PGCnp
DMG:vanEijk_2014
79073TMEM109-transmembrane protein 10911q12.2DMG:vanEijk_2014
6712SPTBN2GTRAP41 | SCA5 | SCAR14spectrin beta, non-erythrocytic 211q13CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
57124CD248CD164L1 | TEM1CD248 molecule11q13CV:PGCnp
DMG:Wockner_2014
2017CTTNEMS1cortactin11q13CV:PGCnp
DMG:Nishioka_2013
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
4926NUMA1NMP-22 | NUMAnuclear mitotic apparatus protein 111q13CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
Ascano FMRP targets
2950GSTP1DFN7 | FAEES3 | GST3 | GSTP | HEL-S-22 | PIglutathione S-transferase pi 111q13CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
83706FERMT3KIND3 | MIG-2 | MIG2B | UNC112C | URP2 | URP2SFfermitin family member 311q13.1CV:PGCnp
1374CPT1ACPT1 | CPT1-L | L-CPT1carnitine palmitoyltransferase 1A11q13.2CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
1207CLNS1ACLCI | CLNS1B | IClnchloride nucleotide-sensitive channel 1A11q14.1DNM:Fromer_2014CompositeSet
6230RPS25S25ribosomal protein S2511q23.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
56912IFT46C11orf2 | C11orf60 | CFAP32intraflagellar transport 4611q23.3CV:PGCnp
GSMA_I
6768ST14ARCI11 | HAI | MT-SP1 | MTSP1 | PRSS14 | SNC19 | TADG15 | TMPRSS14suppression of tumorigenicity 1411q24-q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
27034ACAD8ACAD-8 | ARC42acyl-CoA dehydrogenase family member 811q25CV:PGCnp
DMG:Nishioka_2013
55110MAGOHBMGN2 | mago | magohmago homolog B, exon junction complex core component12p13.2DMG:Jaffe_2016
9332CD163M130 | MM130CD163 molecule12p13.3CV:PGCnp
DNM:Fromer_2014
Network
PMID:cooccur
CompositeSet
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
3892KRT86HB6 | Hb1 | K86 | KRTHB1 | KRTHB6 | MNXkeratin 8612q13CV:PGCnp
DMG:Jaffe_2016
466ATF1EWS-ATF1 | FUS/ATF-1 | TREB36activating transcription factor 112q13CV:PGCnp
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
112802KRT71HYPT13 | K6IRS1 | KRT6IRS | KRT6IRS1keratin 7112q13.13CV:GWASdb
CV:PGCnp
196403DTX3RNF154 | deltex3deltex 3, E3 ubiquitin ligase12q13.3DMG:vanEijk_2014
144321GLIPR1L2-GLI pathogenesis-related 1 like 212q21.2DNM:Gulsuner_2013
9815GIT2CAT-2 | CAT2 | PKLGIT ArfGAP 212q24.1CV:PGCnp
DMG:Jaffe_2016
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
26259FBXW8FBW6 | FBW8 | FBX29 | FBXO29 | FBXW6F-box and WD repeat domain containing 812q24.22CV:PGCnp
PMID:cooccur
8099CDK2AP1DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1cyclin-dependent kinase 2 associated protein 112q24.31CV:PGCnp
LK:YES
PMID:cooccur
196383RILPL2RLP2Rab interacting lysosomal protein like 212q24.31CV:PGCnp
DMG:Jaffe_2016
LK:YES
2706GJB2CX26 | DFNA3 | DFNA3A | DFNB1 | DFNB1A | HID | KID | NSRD1 | PPKgap junction protein beta 213q11-q12CV:PGCnp
DMG:Wockner_2014
241ALOX5APFLAParachidonate 5-lipoxygenase activating protein13q12CV:GWASdb
CV:PGCnp
55504TNFRSF19TAJ | TAJ-alpha | TRADE | TROYtumor necrosis factor receptor superfamily member 1913q12.11-q12.3CV:PGCnp
CV:PheWAS
8848TSC22D1Ptg-2 | TGFB1I4 | TSC22TSC22 domain family member 113q14CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
2308FOXO1FKH1 | FKHR | FOXO1Aforkhead box O113q14.1CV:PGCnp
DMG:Montano_2016
DNM:Guipponi_2014
Network
PMID:cooccur
2098ESDFGHesterase D13q14.1-q14.2Association
CV:PGCnp
PMID:cooccur
1638DCTTRP-2 | TYRP2dopachrome tautomerase13q32CV:PGCnp
PMID:cooccur
23250ATP11AATPIH | ATPISATPase phospholipid transporting 11A13q34CV:PGCnp
DMG:Wockner_2014
Expression
122704MRPL52-mitochondrial ribosomal protein L5214q11.2CV:GWASdb
GSMA_I
112399EGLN3HIFP4H3 | HIFPH3 | PHD3egl-9 family hypoxia-inducible factor 314q13.1CV:GWASdb
CV:PGCnp
GSMA_I
4149MAXbHLHd4MYC associated factor X14q23CV:PGCnp
PMID:cooccur
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
57862ZNF410APA-1 | APA1zinc finger protein 41014q24.3DMG:Jaffe_2016
DNM:Fromer_2014
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
123036TC2NC14orf47 | C2CD1 | MTAC2D1 | Tac2-Ntandem C2 domains, nuclear14q32.12CV:GWASdb
CV:PGCnp
9112MTA1-metastasis associated 114q32.3CV:PGCnp
Network
6218RPS17DBA4 | RPS17L | RPS17L1 | RPS17L2 | S17ribosomal protein S1715qPMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
7337UBE3AANCR | AS | E6-AP | EPVE6AP | HPVE6Aubiquitin protein ligase E3A15q11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
70ACTC1ACTC | ASD5 | CMD1R | CMH11 | LVNC4actin, alpha, cardiac muscle 115q14Network
PMID:cooccur
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
5479PPIBCYP-S1 | CYPB | HEL-S-39 | OI9 | SCYLPpeptidylprolyl isomerase B15q21-q22CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
567B2MIMD43beta-2-microglobulin15q21.1CV:PGCnp
PMID:cooccur
3067HDC-histidine decarboxylase15q21.2CV:PGCnp
PMID:cooccur
4756NEO1IGDCC2 | NGN | NTN1R2neogenin 115q22.3-q23CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
Ascano FMRP targets
10081PDCD7ES18 | HES18programmed cell death 715q22.31CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Network
53346TM6SF1-transmembrane 6 superfamily member 115q24-q26CV:PGCnp
9455HOMER2ACPD | CPD | DFNA68 | HOMER-2 | VESL-2homer scaffolding protein 215q24.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
10099TSPAN3TM4-A | TM4SF8 | TSPAN-3tetraspanin 315q24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5428POLGMDP1 | MIRAS | MTDPS4A | MTDPS4B | PEO | POLG1 | POLGA | SANDO | SCAEpolymerase (DNA) gamma, catalytic subunit15q25CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
176ACANAGC1 | AGCAN | CSPG1 | CSPGCP | MSK16 | SEDKaggrecan15q26.1CV:PGCnpG2Cdb.human_mGluR5
91947ARRDC4-arrestin domain containing 415q26.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
27327TNRC6ACAGH26 | GW1 | GW182 | TNRC6trinucleotide repeat containing 6A16p11.2CV:PGCnp
GSMA_IIE
22928SEPHS2SPS2 | SPS2bselenophosphate synthetase 216p11.2CV:PGCnp
GSMA_IIE
54700RRN3A-270G1.2 | TIFIARRN3 homolog, RNA polymerase I transcription factor16p12CV:PGCnp
GSMA_IIE
1428CRYMDFNA40 | THBPcrystallin mu16p12.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
STRUCTURAL PLASTICITY
CompositeSet
80063ATF7IP2MCAF2activating transcription factor 7 interacting protein 216p13.13CV:PGCnp
PMID:cooccur
9091PIGQGPI1 | c407A10.1phosphatidylinositol glycan anchor biosynthesis class Q16p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
5310PKD1PBP | Pc-1 | TRPP1polycystin 1, transient receptor potential channel interacting16p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
527ATP6V0CATP6C | ATP6L | ATPL | VATL | VPPC | Vma3ATPase H+ transporting V0 subunit c16p13.3CV:PGCnp
DMG:Wockner_2014
ION BALANCE
10573MRPL28MAAT1 | p15mitochondrial ribosomal protein L2816p13.3CV:PGCnp
16AARSCMT2N | EIEE29alanyl-tRNA synthetase16q22CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Ascano FMRP targets
6645SNTB2D16S2531E | EST25263 | SNT2B2 | SNT3 | SNTLsyntrophin beta 216q22.1CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
1003CDH57B4 | CD144cadherin 516q22.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
23644EDC4GE1 | Ge-1 | HEDL5 | HEDLS | RCD-8 | RCD8enhancer of mRNA decapping 416q22.1CV:PGCnpAscano FMRP targets
79152FA2HFAAH | FAH1 | FAXDC1 | SCS7 | SPG35fatty acid 2-hydroxylase16q23CV:GWASdb
CV:PGCnp
PMID:cooccur
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
6154RPL26DBA11 | L26ribosomal protein L2617p13CV:PGCnp
DMG:Nishioka_2013
5430POLR2APOLR2 | POLRA | RPB1 | RPBh1 | RPO2 | RPOL2 | RpIILS | hRPB220 | hsRPB1polymerase (RNA) II subunit A17p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
81565NDEL1EOPA | MITAP1 | NDE1L1 | NDE2 | NUDELnudE neurodevelopment protein 1 like 117p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
3927LASP1Lasp-1 | MLN50LIM and SH3 protein 117q11-q21.3CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
162494RHBDL3RHBDL4 | VRHOrhomboid, veinlet-like 3 (Drosophila)17q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7067THRAAR7 | CHNG6 | EAR7 | ERB-T-1 | ERBA | ERBA1 | NR1A1 | THRA1 | THRA2 | c-ERBA-1thyroid hormone receptor, alpha17q11.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
6532SLC6A45-HTT | 5-HTTLPR | 5HTT | HTT | OCD1 | SERT | SERT1 | hSERTsolute carrier family 6 member 417q11.2ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
3980LIG3LIG2ligase III, DNA, ATP-dependent17q11.2-q12CV:PGCnpAscano FMRP targets
6155RPL27L27ribosomal protein L2717q21CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
284110GSDMAFKSG9 | GSDM | GSDM1gasdermin A17q21.1CV:PGCnp
162427FAM134C-family with sequence similarity 134 member C17q21.2CV:PGCnp
DMG:Jaffe_2016
3487IGFBP4BP-4 | HT29-IGFBP | IBP4 | IGFBP-4insulin like growth factor binding protein 417q21.2CV:PGCnp
PMID:cooccur
3885KRT34HA4 | Ha-4 | KRTHA4 | hHa4keratin 3417q21.2CV:PGCnp
DMG:Wockner_2014
3886KRT35HA5 | Ha-5 | KRTHA5 | hHa5keratin 3517q21.2CV:GWASdb
CV:PGCnp
147183KRT25ARWH3 | KRT24IRS1 | KRT25Akeratin 2517q21.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
9343EFTUD2MFDGA | MFDM | SNRNP116 | Snrp116 | Snu114 | U5-116KDelongation factor Tu GTP binding domain containing 217q21.31CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
10241CALCOCO2NDP52calcium binding and coiled-coil domain 217q21.32CV:PGCnp
6662SOX9CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10SRY-box 917q24.3CV:PGCnp
PMID:cooccur
10672GNA13G13G protein subunit alpha 1317q24.3CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
10476ATP5HATPQATP synthase, H+ transporting, mitochondrial Fo complex subunit D17q25CV:PGCnp
DMG:Jaffe_2016
339230CCDC137RaRFcoiled-coil domain containing 13717q25.3CV:PGCnp
DNM:Girard_2011
CompositeSet
64118DUS1LDUS1 | PP3111dihydrouridine synthase 1 like17q25.3CV:PGCnpAscano FMRP targets
5932RBBP8COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2retinoblastoma binding protein 818q11.2CV:PGCnp
DMG:Jaffe_2016
25925ZNF521EHZF | Evi3zinc finger protein 52118q11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Darnell FMRP targets
Ascano FMRP targets
56853CELF4BRUNOL4 | CELF-4CUGBP, Elav-like family member 418q12CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10982MAPRE2CSCSC2 | EB1 | EB2 | RP1microtubule associated protein RP/EB family member 218q12.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
25800SLC39A6LIV-1 | ZIP6solute carrier family 39 member 618q12.2CV:PGCnp
4089SMAD4DPC4 | JIP | MADH4 | MYHRSSMAD family member 418q21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
4155MBP-myelin basic protein18q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
2587GALR1GALNR | GALNR1galanin receptor 118q23CV:PGCnp
GO_Annotation
PMID:cooccur
10907TXNL4ABMKS | DIB1 | DIM1 | SNRNP15 | TXNL4 | U5-15kDthioredoxin like 4A18q23CV:PGCnp
83878USHBP1AIEBP | MCC2USH1 protein network component harmonin binding protein 119p13CV:GWASdb
CV:PGCnp
PMID:cooccur
811CALRCRT | HEL-S-99n | RO | SSA | cC1qRcalreticulin19p13.13CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
29911HOOK2HK2hook microtubule-tethering protein 219p13.2CV:PGCnp
4298MLLT1ENL | LTG19 | YEATS1myeloid/lymphoid or mixed-lineage leukemia; translocated to, 119p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
56928SPPL2BIMP-4 | IMP4 | PSH4 | PSL1signal peptide peptidase like 2B19p13.3CV:PGCnp
PMID:cooccur
5655KLK10NES1 | PRSSL1kallikrein related peptidase 1019q13DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
7305TYROBPDAP12 | KARAP | PLOSLTYRO protein tyrosine kinase binding protein19q13.12PMID:cooccur
51599LSRILDR3 | LISCH7lipolysis stimulated lipoprotein receptor19q13.12CV:GWASdb
CV:PGCnp
PMID:cooccur
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
22952CYP2G1PCYP2G1 | CYP2G2P | CYP2GP1cytochrome P450 family 2 subfamily G member 1, pseudogene19q13.2CV:PGCnp
6510SLC1A5AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRCsolute carrier family 1 member 519q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79784MYH14DFNA4 | DFNA4A | FP17425 | MHC16 | MYH17 | NMHC II-C | NMHC-II-C | PNMHH | myosinmyosin, heavy chain 14, non-muscle19q13.33CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7138TNNT1ANM | NEM5 | STNT | TNT | TNTStroponin T1, slow skeletal type19q13.4DMG:Wockner_2014
PMID:cooccur
6272SORT1Gp95 | LDLCQ6 | NT3 | NTR3sortilin 11p13.3|1p21.3-p13.1DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
1301COL11A1CO11A1 | COLL6 | STL2collagen type XI alpha 11p21CV:GWASdb
CV:PGCnp
1952CELSR2ADGRC2 | CDHF10 | EGFL2 | Flamingo1 | MEGF3cadherin EGF LAG seven-pass G-type receptor 21p21CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9403SEP15-15 kDa selenoprotein1p31CV:PGCnp
DMG:Wockner_2014
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
9202ZMYM4CDIR | MYM | ZNF198L3 | ZNF262zinc finger MYM-type containing 41p32-p34CV:PGCnp
CV:PheWAS
5792PTPRFBNAH2 | LARprotein tyrosine phosphatase, receptor type F1p34CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
22955SCMH1Scml3sex comb on midleg homolog 1 (Drosophila)1p34CV:PGCnpChromatin Remodeling Genes
23154NCDN-neurochondrin1p34.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23633KPNA6IPOA7 | KPNA7karyopherin subunit alpha 61p35.1CV:PGCnp
DMG:Nishioka_2013
1855DVL1DRS2 | DVL | DVL1L1 | DVL1P1dishevelled segment polarity protein 11p36DNM:Fromer_2014
Network
CompositeSet
832CAPZBCAPB | CAPPB | CAPZcapping actin protein of muscle Z-line beta subunit1p36.1CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
84065TMEM222C1orf160transmembrane protein 2221p36.11CV:PGCnp
DMG:Jaffe_2016
55920RCC2TD-60regulator of chromosome condensation 21p36.13CV:PGCnp
DMG:Wockner_2014
765CA6CA-VI | GUSTINcarbonic anhydrase VI1p36.2CV:PGCnp
56998CTNNBIP1ICATcatenin beta interacting protein 11p36.22CV:PGCnp
DMG:Wockner_2014
Network
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
5226PGD6PGDphosphogluconate dehydrogenase1p36.22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
65220NADKdJ283E3.1NAD kinase1p36.33CV:PGCnp
DMG:Wockner_2014
6279S100A860B8AG | CAGA | CFAG | CGLA | CP-10 | L1Ag | MA387 | MIF | MRP8 | NIF | P8S100 calcium binding protein A81q21GSMA_I
GSMA_IIA
PMID:cooccur
8682PEA15HMAT1 | HUMMAT1H | MAT1 | MAT1H | PEA-15 | PEDphosphoprotein enriched in astrocytes 151q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
8394PIP5K1A-phosphatidylinositol-4-phosphate 5-kinase, type I, alpha1q21.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
GSMA_IIA
25778DSTYKCAKUT1 | DustyPK | HDCMD38P | RIP5 | RIPK5dual serine/threonine and tyrosine protein kinase1q32.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
9911TMCC2HUCEP11transmembrane and coiled-coil domain family 21q32.1CV:PGCnp
DMG:Jaffe_2016
5362PLXNA2OCT | PLXN2plexin A21q32.2Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
467ATF3-activating transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
140885SIRPABIT | CD172A | MFR | MYD-1 | P84 | PTPNS1 | SHPS1 | SIRPsignal regulatory protein alpha20p13CV:PGCnp
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5621PRNPASCR | AltPrP | CD230 | CJD | GSS | KURU | PRIP | PrP | PrP27-30 | PrP33-35C | PrPc | p27-30prion protein20p13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
128869PIGUCDC91L1 | GAB1phosphatidylinositol glycan anchor biosynthesis class U20q11.22CV:PGCnp
58476TP53INP2C20orf110 | DOR | PINH | dJ1181N3.1tumor protein p53 inducible nuclear protein 220q11.22CV:PGCnp
DMG:vanEijk_2014
3929LBPBPIFD2lipopolysaccharide binding protein20q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
57727NCOA5CIA | bA465L10.6nuclear receptor coactivator 520q13.12CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
1908EDN3ET-3 | ET3 | HSCR4 | PPET3 | WS4Bendothelin 320q13.2-q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
3911LAMA5-laminin subunit alpha 520q13.2-q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6227RPS21HLDF | S21ribosomal protein S2120q13.3CV:PGCnp
DMG:Nishioka_2013
79716NPEPL1bA261P9.2aminopeptidase-like 120q13.32CV:PGCnp
9217VAPBALS8 | VAMP-B | VAP-BVAMP (vesicle-associated membrane protein)-associated protein B and C20q13.33CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
337972KRTAP19-5KAP19.5keratin associated protein 19-521q22.1CV:PGCnp
6651SONBASS1 | C21orf50 | DBP-5 | NREBP | SON3SON DNA binding protein21q22.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
23515MORC3NXP2 | ZCW5 | ZCWCC3MORC family CW-type zinc finger 321q22.13CV:PGCnp
9980DOPEY221orf5 | C21orf5dopey family member 221q22.2CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
754PTTG1IPC21orf1 | C21orf3 | PBFpituitary tumor-transforming 1 interacting protein21q22.3DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
6285S100BNEF | S100 | S100-B | S100betaS100 calcium binding protein B21q22.3Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
54101RIPK4ANKK2 | ANKRD3 | DIK | NKRD3 | PKK | PPS2 | RIP4receptor interacting serine/threonine kinase 421q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
728229TMEM191B-transmembrane protein 191B22q11.21CNV:YES
CV:PGCnp
128977C22orf39-chromosome 22 open reading frame 3922q11.21CNV:YES
CV:PGCnp
613BCRALL | BCR1 | CML | D22S11 | D22S662 | PHLbreakpoint cluster region22q11.23CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
23598PATZ1MAZR | PATZ | RIAZ | ZBTB19 | ZNF278 | ZSG | dJ400N23POZ/BTB and AT hook containing zinc finger 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
57591MKL1BSAC | MAL | MRTF-Amegakaryoblastic leukemia (translocation) 122q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
11017SNRNP2727K | RY1small nuclear ribonucleoprotein U4/U6.U5 subunit 272p13.3CV:PGCnp
5581PRKCEPKCE | nPKC-epsilonprotein kinase C epsilon2p21CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2034EPAS1ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73endothelial PAS domain protein 12p21-p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
25797QPCTGCT | QC | sQCglutaminyl-peptide cyclotransferase2p22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
79745CLIP4RSNL2CAP-Gly domain containing linker protein family member 42p23.2CV:PGCnp
PMID:cooccur
9784SNX17-sorting nexin 172p23.3CV:PGCnp
6664SOX11MRD27SRY-box 112p25CV:PGCnp
GO_Annotation
PMID:cooccur
29841GRHL1LBP32 | MGR | NH32 | TFCP2L2grainyhead like transcription factor 12p25.1CV:PGCnp
Expression
91543RSAD22510004L01Rik | cig33 | cig5 | vig1radical S-adenosyl methionine domain containing 22p25.2CV:PGCnp
284996RNF149DNAPTP2ring finger protein 1492q11.2CV:PGCnp
GSMA_I
9173IL1RL1DER4 | FIT-1 | IL33R | ST2 | ST2L | ST2V | T1interleukin 1 receptor like 12q12CV:GWASdb
CV:PGCnp
GSMA_I
84417C2orf40ECRG4chromosome 2 open reading frame 402q12.2CV:PGCnp
GSMA_I
GSMA_IIA
7130TNFAIP6TSG-6 | TSG6TNF alpha induced protein 62q23.3CV:PGCnp
GSMA_IIA
57282SLC4A10NBCn2 | NCBEsolute carrier family 4 member 102q24.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_IIA
ION BALANCE
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
3485IGFBP2IBP2 | IGF-BP53insulin like growth factor binding protein 22q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
6168RPL37AL37Aribosomal protein L37a2q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
3431SP110IFI41 | IFI75 | IPR1 | VODISP110 nuclear body protein2q37.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
150678MYEOV2-myeloma overexpressed 22q37.3CV:PGCnp
DMG:Wockner_2014
5449POU1F1CPHD1 | GHF-1 | PIT1 | POU1F1a | Pit-1POU class 1 homeobox 13p11CV:PGCnp
GSMA_IIA
GSMA_IIE
4134MAP4-microtubule associated protein 43p21CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
7134TNNC1CMD1Z | CMH13 | TN-C | TNC | TNNCtroponin C1, slow skeletal and cardiac type3p21.1ADT:Sun_2012
CV:PGCnp
LK:YES
10039PARP3ADPRT3 | ADPRTL2 | ADPRTL3 | ARTD3 | IRT1 | PADPRT-3poly(ADP-ribose) polymerase family member 33p21.2CV:PGCnp
DMG:Nishioka_2013
10869USP19ZMYND9ubiquitin specific peptidase 193p21.31CV:PGCnpAscano FMRP targets
93ACVR2BACTRIIB | ActR-IIB | HTX4activin A receptor type 2B3p22CV:PGCnp
GSMA_I
2803GOLGA4CRPF46 | GCP2 | GOLG | MU-RMS-40.18 | p230golgin A43p22-p21.3CV:PGCnp
GSMA_I
55207ARL8BARL10C | Gie1ADP ribosylation factor like GTPase 8B3p26.1CV:PGCnp
DMG:vanEijk_2014
Network
INTRACELLULAR TRAFFICKING
7200TRHPro-TRH | TRFthyrotropin releasing hormone3q13.3-q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
11343MGLLHU-K5 | HUK5 | MAGL | MGLmonoglyceride lipase3q21.3CV:PGCnp
PMID:cooccur
CANABINOID
CELL METABOLISM
1359CPA3MC-CPAcarboxypeptidase A33q24CV:PGCnp
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
56925LXNECI | TCIlatexin3q25.32DMG:vanEijk_2014
6657SOX2ANOP3 | MCOPS3SRY-box 23q26.33Expression
PMID:cooccur
55646LYARZC2HC2 | ZLYARLy1 antibody reactive4p16.3CV:PGCnp
10417SPON2DIL-1 | DIL1 | M-SPONDIN | MINDINspondin 24p16.3CV:PGCnp
GO_Annotation
126ADH1CADH3alcohol dehydrogenase 1C (class I), gamma polypeptide4q23CV:PGCnp
PMID:cooccur
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
5308PITX2ARP1 | Brx1 | IDG2 | IGDS | IGDS2 | IHG2 | IRID2 | Otlx2 | PTX2 | RGS | RIEG | RIEG1 | RSpaired like homeodomain 24q25CV:PGCnp
PMID:cooccur
27123DKK2DKK-2dickkopf WNT signaling pathway inhibitor 24q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7350UCP1SLC25A7 | UCPuncoupling protein 1 (mitochondrial, proton carrier)4q28-q31CV:PGCnp
GO_Annotation
PMID:cooccur
8492PRSS12BSSP-3 | BSSP3 | MRT1protease, serine 124q28.1CV:PGCnp
GO_Annotation
Potential synaptic genes
6423SFRP2FRP-2 | SARP1 | SDF-5secreted frizzled-related protein 24q31.3CV:PGCnp
85462FHDC1-FH2 domain containing 14q31.3CV:PGCnp
CV:PheWAS
23321TRIM2CMT2R | RNF86tripartite motif containing 24q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
56034PDGFCFALLOTEIN | SCDGFplatelet derived growth factor C4q32CV:PGCnp
DMG:Jaffe_2016
1182CLCN3CLC3 | ClC-3chloride voltage-gated channel 34q33CV:GWAScat
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10409BASP1CAP-23 | CAP23 | NAP-22 | NAP22brain abundant membrane attached signal protein 15p15.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4651MYO10-myosin X5p15.1CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1611DAP-death-associated protein5p15.2CV:GWASdb
CV:PGCnp
PMID:cooccur
50805IRX4IRXA3iroquois homeobox 45p15.3CV:PGCnp
DMG:Jaffe_2016
79888LPCAT1AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcatlysophosphatidylcholine acyltransferase 15p15.33CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
84327ZBED3-zinc finger BED-type containing 35q13.3CV:PGCnp
DMG:Jaffe_2016
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
51523CXXC5CF5 | HSPC195 | RINF | WIDCXXC finger protein 55q31.2CV:PGCnp
GSMA_I
1436CSF1RC-FMS | CD115 | CSF-1R | CSFR | FIM2 | FMS | HDLS | M-CSF-Rcolony stimulating factor 1 receptor5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4238MFAP3-microfibrillar associated protein 35q32-q33.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
821CANXCNX | IP90 | P90calnexin5q35CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
4488MSX2CRS2 | FPP | HOX8 | MSH | PFM | PFM1msh homeobox 25q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
27232GNMTHEL-S-182mPglycine N-methyltransferase6p12GSMA_I
GSMA_IIE
PMID:cooccur
7021TFAP2BAP-2B | AP2-Btranscription factor AP-2 beta (activating enhancer binding protein 2 beta)6p12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
2729GCLCGCL | GCS | GLCL | GLCLCglutamate-cysteine ligase catalytic subunit6p12CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
3710ITPR3IP3R | IP3R3inositol 1,4,5-trisphosphate receptor type 36p21CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
57510XPO5exp5exportin 56p21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
170680PSORS1C2C6orf17 | SPR1psoriasis susceptibility 1 candidate 26p21.3CV:GWASdb
CV:PGCnp
GSMA_I
58530LY6G6DC6orf23 | G6D | LY6-D | MEGT1 | NG25lymphocyte antigen 6 complex, locus G6D6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
780DDR1CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKEdiscoidin domain receptor tyrosine kinase 16p21.3Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
6222RPS18D6S218E | HKE3 | KE-3 | KE3 | S18ribosomal protein S186p21.3CV:PGCnp
GSMA_I
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3006HIST1H1CH1.2 | H1C | H1F2 | H1s-1histone cluster 1, H1c6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3017HIST1H2BDH2B.1B | H2B/b | H2BFB | HIRIP2 | dJ221C16.6histone cluster 1, H2bd6p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
2739GLO1GLOD1 | GLYI | HEL-S-74glyoxalase I6p21.3-p21.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
GSMA_IIE
PMID:cooccur
CELL METABOLISM
2289FKBP5AIG6 | FKBP51 | FKBP54 | P54 | PPIase | Ptg-10FK506 binding protein 56p21.31CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
670BPHLBPH-RP | MCNAA | VACVASEbiphenyl hydrolase-like (serine hydrolase)6p25CV:PGCnp
GSMA_I
4199ME1HUMNDME | MESmalic enzyme 1, NADP(+)-dependent, cytosolic6q12CV:PGCnp
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
79683ZDHHC14NEW1CPzinc finger DHHC-type containing 146q25.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
6582SLC22A2OCT2solute carrier family 22 member 26q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
908CCT6ACCT-zeta | CCT-zeta-1 | CCT6 | Cctz | HTR3 | MoDP-2 | TCP-1-zeta | TCP20 | TCPZ | TTCP20chaperonin containing TCP1 subunit 6A7p11.2CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2887GRB10GRB-IR | Grb-10 | IRBP | MEG1 | RSSgrowth factor receptor bound protein 107p12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
196AHRbHLHe76aryl hydrocarbon receptor7p15CV:PGCnp
PMID:cooccur
4852NPYPYY4neuropeptide Y7p15.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
948CD36BDPLT10 | CHDS7 | FAT | GP3B | GP4 | GPIV | PASIV | SCARB3CD36 molecule7q11.2CV:GWASdb
CV:PGCnp
PMID:cooccur
2006ELNSVAS | WBS | WSelastin7q11.23CNV:YES
CV:PGCnp
GO_Annotation
9569GTF2IRD1BEN | CREAM1 | GTF3 | MUSTRD1 | RBAP2 | WBS | WBSCR11 | WBSCR12 | hMusTRD1alpha1GTF2I repeat domain containing 17q11.23CNV:YES
CV:PGCnp
DMG:Wockner_2014
DNM:Ambalavanan_2016
PMID:cooccur
Ascano FMRP targets
29992PILRAFDF03paired immunoglobin-like type 2 receptor alpha7q22.1CV:PGCnp
DMG:vanEijk_2014
83943IMMP2LIMMP2L-IT1 | IMP2 | IMP2-LIKEinner mitochondrial membrane peptidase subunit 27q31CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:PheWAS
GO_Annotation
PMID:cooccur
5803PTPRZ1HPTPZ | HPTPzeta | PTP-ZETA | PTP18 | PTPRZ | PTPZ | R-PTP-zeta-2 | RPTPB | RPTPbeta | phosphacanprotein tyrosine phosphatase, receptor type Z17q31.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
6608SMOFZD11 | Gx | SMOHsmoothened, frizzled class receptor7q32.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
4850CNOT4CLONE243 | NOT4 | NOT4HCCR4-NOT transcription complex subunit 47q33CV:PGCnp
DMG:Nishioka_2013
5304PIPGCDFP-15 | GCDFP15 | GPIP4prolactin-induced protein7q34CV:PGCnp
PMID:cooccur
64327LMBR1ACHP | C7orf2 | DIF14 | LSS | PPD2 | THYP | TPT | ZRSlimb development membrane protein 17q36CV:GWASdb
CV:PGCnp
9530BAG4BAG-4 | SODDBCL2 associated athanogene 48p11.23CV:PGCnp
51435SCARA3APC7 | CSR | CSR1 | MSLR1 | MSRL1scavenger receptor class A member 38p21CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1191CLUAAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2clusterin8p21-p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
55756INTS9CPSF2L | INT9 | RC74integrator complex subunit 98p21.1CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
23516SLC39A14LZT-Hs4 | NET34 | ZIP14 | cig19solute carrier family 39 member 148p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
4481MSR1CD204 | SCARA1 | SR-A | SRA | phSR1 | phSR2macrophage scavenger receptor 18p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
55326AGPAT51AGPAT5 | LPAATE1-acylglycerol-3-phosphate O-acyltransferase 58p23.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
8439NSMAFFAN | GRAMD5neutral sphingomyelinase activation associated factor8q12.1CV:PGCnp
DMG:Jaffe_2016
3646EIF3EEIF3-P48 | EIF3S6 | INT6 | eIF3-p46eukaryotic translation initiation factor 3 subunit E8q22-q23CV:PGCnp
DMG:Jaffe_2016
Network
25962KIAA1429MSTP054 | fSAP121KIAA14298q22.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
8323FZD6FZ-6 | FZ6 | HFZ6 | NDNC10frizzled class receptor 68q22.3-q23.1CV:GWASdb
CV:PGCnp
4856NOVCCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVhnephroblastoma overexpressed8q24.1PMID:cooccur
10221TRIB1C8FW | GIG-2 | GIG2 | SKIP1 | TRB-1 | TRB1tribbles pseudokinase 18q24.13CV:PGCnp
DMG:Jaffe_2016
10397NDRG1CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5N-myc downstream regulated 18q24.3CV:PGCnp
DEG:Zhao_2015
Network
84720PIGOHPMRS2phosphatidylinositol glycan anchor biosynthesis class O9p13.3CV:PGCnp
DMG:Nishioka_2013
4781NFIBCTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3nuclear factor I/B9p24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
2619GAS1-growth arrest specific 19q21.3-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
2203FBP1FBPfructose-bisphosphatase 19q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
23299BICD2SMALED2 | bA526D8.1bicaudal D homolog 2 (Drosophila)9q22.31CV:GWASdb
CV:PGCnp
PMID:cooccur
8727CTNNAL1ACRP | CLLP | alpha-CATUcatenin alpha-like 19q31.2CV:GWASdb
CV:PGCnp
7539ZFP37ZNF906 | zfp-37ZFP37 zinc finger protein9q32CV:PGCnp
8019BRD3ORFX | RING3Lbromodomain containing 39q34CV:PGCnp
DMG:Wockner_2014
140459ASB6-ankyrin repeat and SOCS box containing 69q34.13CV:PGCnp
DMG:Jaffe_2016
5730PTGDSL-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2prostaglandin D2 synthase9q34.2-q34.3PMID:cooccur
4851NOTCH1AOS5 | AOVD1 | TAN1 | hN1notch 19q34.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
10075HUWE1ARF-BP1 | HECTH9 | HSPC272 | Ib772 | LASU1 | MULE | URE-B1 | UREB1HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligaseXp11.22CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
90293KLHL13BKLHD2kelch like family member 13Xq23-q24CV:GWASdb
CV:PGCnp
2334AFF2FMR2 | FMR2P | FRAXE | MRX2 | OX19AF4/FMR2 family member 2Xq28CV:GWASdb
CV:PGCnp
GO_Annotation
Potential synaptic genes
5365PLXNB3PLEXB3 | PLEXR | PLXN6plexin B3Xq28CV:PGCnp
PMID:cooccur
Potential synaptic genes