Search results: The pahtway p2093 has 747 genes in the original annotation. Currently, there are 453 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
22943DKK1DKK-1 | SKdickkopf WNT signaling pathway inhibitor 110q11.2CV:PGCnp
PMID:cooccur
1979EIF4EBP24EBP2 | PHASIIeukaryotic translation initiation factor 4E binding protein 210q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
219738C10orf35-chromosome 10 open reading frame 3510q22.1CV:GWASdb
CV:PGCnp
CompositeSet
219743TYSND1NET41trypsin domain containing 110q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
55280CWF19L1C19L1 | SCAR17CWF19-like 1, cell cycle control (S. pombe)10q24.31CV:PGCnp
6319SCDFADS5 | MSTP008 | SCD1 | SCDOS | hSCD1stearoyl-CoA desaturase (delta-9-desaturase)10q24.31CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
51317PHF21ABHC80 | BM-006PHD finger protein 21A11p11.2CV:PGCnp
PMID:cooccur
10553HTATIP2CC3 | SDR44U1 | TIP30HIV-1 Tat interactive protein 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
9415FADS2D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13fatty acid desaturase 211q12.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
10313RTN3ASYIP | HAP | NSPL2 | NSPLII | RTN3-A1reticulon 311q13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
402ARL2ARFL2ADP ribosylation factor like GTPase 211q13DMG:Nishioka_2013
DMG:Wockner_2014
5058PAK1PAKalphap21 protein (Cdc42/Rac)-activated kinase 111q13.5-q14.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
54843SYTL2CHR11SYT | EXO4 | PPP1R151 | SGA72M | SLP2 | SLP2Asynaptotagmin like 211q14CV:PGCnp
DEG:Zhao_2015
GO_Annotation
EXOCYTOSIS
1740DLG2PPP1R58 | PSD-93 | PSD93 | chapsyn-110discs large homolog 211q14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
219902TMEM136-transmembrane protein 13611q23.3CV:PGCnp
GSMA_I
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1663DDX11CHL1 | CHLR1 | KRG2 | WABSDEAD/H-box helicase 1112p11CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
715C1R-complement C1r subcomponent12p13CV:PGCnp
GO_Annotation
6540SLC6A13GAT-2 | GAT2 | GAT3solute carrier family 6 member 1312p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
65125WNK1HSAN2 | HSN2 | KDP | PPP1R167 | PRKWNK1 | PSK | p65WNK lysine deficient protein kinase 112p13.3CV:PGCnp
DEG:Maycox_2009
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
440081DDX12PCHLR2 | DDX12DEAD/H-box helicase 12, pseudogene12p13.31CV:PGCnp
DMG:Jaffe_2016
9700ESPL1ESP1 | SEPAextra spindle pole bodies like 1, separase12qCV:PGCnp
GO_Annotation
Ascano FMRP targets
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6334SCN8ACERIII | CIAT | EIEE13 | MED | NaCh6 | Nav1.6 | PN4sodium voltage-gated channel alpha subunit 812q13CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
CompositeSet
Darnell FMRP targets
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
65244SPATS2Nbla00526 | P59SCR | SCR59 | SPATA10spermatogenesis associated serine rich 212q13.12CV:PGCnp
DMG:Jaffe_2016
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
10445MCRS1ICP22BP | INO80Q | MCRS2 | MSP58 | P78microspherule protein 112q13.12CV:PGCnp
DMG:Jaffe_2016
1431CS-citrate synthase12q13.2CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
11260XPOTXPO3exportin for tRNA12q14.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
8549LGR5FEX | GPR49 | GPR67 | GRP49 | HG38leucine-rich repeat containing G protein-coupled receptor 512q21.1CV:PGCnp
DMG:Wockner_2014
Expression
7103TSPAN8CO-029 | TM4SF3tetraspanin 812q21.1CV:PGCnp
PMID:cooccur
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
28977MRPL42HSPC204 | L31MT | L42MT | MRP-L31 | MRP-L42 | MRP-S32 | MRPL31 | MRPS32 | PTD007 | RPML31 | S32MTmitochondrial ribosomal protein L4212q22CV:PGCnp
64431ACTR6ARP6 | CDA12 | HSPC281 | MSTP136 | hARP6 | hARPXARP6 actin-related protein 6 homolog (yeast)12q23.1CV:PGCnp
DMG:Nishioka_2013
79023NUP37p37nucleoporin 37kDa12q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
7296TXNRD1GRIM-12 | TR | TR1 | TRXR1 | TXNRthioredoxin reductase 112q23.3CV:PGCnp
10154PLXNC1CD232 | PLXN-C1 | VESPRplexin C112q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
89910UBE3BBPIDS | KOSubiquitin protein ligase E3B12q24.11CV:PGCnpCompositeSet
Darnell FMRP targets
84749USP30-ubiquitin specific peptidase 3012q24.11CV:PGCnp
28981IFT81CDV-1 | CDV-1R | CDV1 | CDV1R | DV1intraflagellar transport 8112q24.13CV:PGCnp
DNM:Xu_2012
CompositeSet
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
65985AACSACSF1 | SUR-5acetoacetyl-CoA synthetase12q24.31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
5025P2RX4P2X4 | P2X4Rpurinergic receptor P2X 412q24.32CV:PGCnp
GO_Annotation
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
440145MZT1C13orf37 | MOZART1mitotic spindle organizing protein 113q22.1CV:PGCnp
8428STK24HEL-S-95 | MST3 | MST3B | STE20 | STK3serine/threonine kinase 2413q31.2-q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7546ZIC2HPE5Zic family member 213q32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
1284COL4A2ICH | POREN2collagen type IV alpha 213q34CV:GWAScat
CV:GWASdb
CV:PGCnp
5911RAP2AK-REV | KREV | RAP2 | RbBP-30RAP2A, member of RAS oncogene family13q34CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
11198SUPT16HCDC68 | FACTP140 | SPT16 | SPT16/CDC68SPT16 homolog, facilitates chromatin remodeling subunit14q11.2CV:PGCnp
GSMA_I
Potential synaptic genes
29091STXBP6HSPC156 | amisynsyntaxin binding protein 614q12CV:GWASdb
CV:PGCnp
Expression
GSMA_I
EXOCYTOSIS
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
53981CPSF2CPSF100cleavage and polyadenylation specific factor 214q31.1CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
1778DYNC1H1CMT2O | DHC1 | DHC1a | DNCH1 | DNCL | DNECL | DYHC | Dnchc1 | HL-3 | SMALED1 | p22dynein cytoplasmic 1 heavy chain 114q32CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
115708TRMT61AC14orf172 | GCD14 | Gcd14p | TRM61 | hTRM61tRNA methyltransferase 61A14q32CV:PGCnp
7517XRCC3CMM6X-ray repair complementing defective repair in Chinese hamster cells 314q32.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
51621KLF13BTEB3 | FKLF2 | NSLP1 | RFLAT-1 | RFLAT1Kruppel-like factor 1315q12CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
84529C15orf41HH114chromosome 15 open reading frame 4115q14CV:PGCnp
7158TP53BP153BP1 | TDRD30 | TP53 | p202 | p53BP1tumor protein p53 binding protein 115q15-q21CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
55930MYO5C-myosin VC15q21CV:PGCnp
DMG:Wockner_2014
10681GNB5GB5G protein subunit beta 515q21.2CV:PGCnp
DNM:Fromer_2014
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3175ONECUT1HNF-6 | HNF6 | HNF6Aone cut homeobox 115q21.3CV:PGCnp
DMG:Wockner_2014
302ANXA2ANX2 | ANX2L4 | CAL1H | HEL-S-270 | LIP2 | LPC2 | LPC2D | P36 | PAP-IVannexin A215q22.2CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
8766RAB11AYL8RAB11A, member RAS oncogene family15q22.31CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
64843ISL2-ISL LIM homeobox 215q23CV:PGCnp
6627SNRPA1Lea1small nuclear ribonucleoprotein polypeptide A'15q26.3CV:PGCnp
DMG:Wockner_2014
50615IL21RCD360 | NILRinterleukin 21 receptor16p11CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
4150MAZPUR1 | Pur-1 | SAF-1 | SAF-2 | SAF-3 | ZF87 | ZNF801 | Zif87MYC associated zinc finger protein16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
CompositeSet
Darnell FMRP targets
226ALDOAALDA | GSD12 | HEL-S-87paldolase, fructose-bisphosphate A16p11.2CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
26470SEZ6L2BSRPA | PSK-1seizure related 6 homolog (mouse)-like 216p11.2CNV:YES
CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
CompositeSet
Darnell FMRP targets
1201CLN3BTS | JNCLceroid-lipofuscinosis, neuronal 316p12.1DMG:Jaffe_2016
DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
PMID:cooccur
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
368ABCC6ABC34 | ARA | EST349056 | GACI2 | MLP1 | MOAT-E | MOATE | MRP6 | PXE | PXE1 | URG7ATP binding cassette subfamily C member 616p13.1CNV:YES
CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
283871PGPPGPasephosphoglycolate phosphatase16p13.3PMID:cooccur
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
1728NQO1DHQU | DIA4 | DTD | NMOR1 | NMORI | QR1NAD(P)H dehydrogenase, quinone 116q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
1856DVL2-dishevelled segment polarity protein 217p13.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Network
PMID:cooccur
1801DPH1DPH2L | DPH2L1 | OVCA1diphthamide biosynthesis 117p13.3CV:PGCnp
DMG:Nishioka_2013
26022TMEM98TADA1transmembrane protein 9817q11.2CV:PGCnp
DMG:Wockner_2014
1362CPDGP180carboxypeptidase D17q11.2CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
3980LIG3LIG2ligase III, DNA, ATP-dependent17q11.2-q12CV:PGCnpAscano FMRP targets
31ACACAACAC | ACACAD | ACC | ACC1 | ACCAacetyl-CoA carboxylase alpha17q21CNV:YES
CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
27175TUBG2-tubulin gamma 217q21CV:PGCnp
DMG:Jaffe_2016
7283TUBG1CDCBM4 | GCP-1 | TUBG | TUBGCP1tubulin gamma 117q21CV:PGCnp
Network
10493VAT1VATIvesicle amine transport 117q21CV:PGCnp
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
10951CBX1CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25betachromobox 117q21.32CV:PGCnp
10642IGF2BP1CRD-BP | CRDBP | IMP-1 | IMP1 | VICKZ1 | ZBP1insulin like growth factor 2 mRNA binding protein 117q21.32CV:PGCnp
DMG:Jaffe_2016
2896GRNCLN11 | GEP | GP88 | PCDGF | PEPI | PGRNgranulin17q21.32CV:PGCnp
PMID:cooccur
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
54894RNF43RNF124 | URCCring finger protein 4317q22CV:PGCnp
124540MSI2MSI2Hmusashi RNA binding protein 217q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10238DCAF7AN11 | HAN11 | SWAN-1 | WDR68DDB1 and CUL4 associated factor 717q23.3CV:PGCnp
DMG:Wockner_2014
5635PRPSAP1PAP39phosphoribosyl pyrophosphate synthetase-associated protein 117q24-q25CV:PGCnp
DMG:Jaffe_2016
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
5578PRKCAAAG6 | PKC-alpha | PKCA | PRKACAprotein kinase C alpha17q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
9146HGSHRShepatocyte growth factor-regulated tyrosine kinase substrate17q25CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
9368SLC9A3R1EBP50 | NHERF | NHERF-1 | NHERF1 | NPHLOP2SLC9A3 regulator 117q25.1DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
ION BALANCE
CompositeSet
57521RPTORKOG1 | Mip1regulatory associated protein of MTOR, complex 117q25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2873GPS1COPS1 | CSN1 | SGN1G protein pathway suppressor 117q25.3CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
57674RNF213ALO17 | C17orf27 | KIAA1618 | MYMY2 | MYSTR | NET57ring finger protein 21317q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
84733CBX2CDCA6 | M33 | SRXY5chromobox 217q25.3CV:GWASdb
CV:PGCnp
Expression
Ascano FMRP targets
Chromatin Remodeling Genes
63895PIEZO2C18orf30 | C18orf58 | DA3 | DA5 | FAM38B | FAM38B2 | HsT748 | HsT771 | MWKSpiezo type mechanosensitive ion channel component 218p11.22CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
81035COLEC12CLP1 | NSR2 | SCARA4 | SRCLcollectin subfamily member 1218p11.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5289PIK3C3VPS34 | Vps34 | hVps34phosphatidylinositol 3-kinase catalytic subunit type 318q12.3Association
CV:PGCnp
GR_WM
PMID:cooccur
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
9480ONECUT2OC-2 | OC2one cut homeobox 218q21.31CV:PGCnp
DMG:Jaffe_2016
23327NEDD4LNEDD4-2 | NEDD4.2 | RSP5 | hNEDD4-2neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase18q21.31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
4854NOTCH3CADASIL | CADASIL1 | CASIL | IMF2 | LMNSnotch 319p13.12CV:PGCnp
GO_Annotation
PMID:cooccur
55723ASF1BCIA-IIanti-silencing function 1B histone chaperone19p13.12DMG:Jaffe_2016Chromatin Remodeling Genes
811CALRCRT | HEL-S-99n | RO | SSA | cC1qRcalreticulin19p13.13CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
5886RAD23AHHR23A | HR23ARAD23 homolog A, nucleotide excision repair protein19p13.2CV:PGCnp
6597SMARCA4BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2bSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 419p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
10036CHAF1ACAF-1 | CAF1 | CAF1B | CAF1P150 | P150chromatin assembly factor 1 subunit A19p13.3CV:PGCnp
DMG:Wockner_2014
Network
682BSG5F7 | CD147 | EMMPRIN | M6 | OK | TCSFbasigin (Ok blood group)19p13.3CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
587BCAT2BCAM | BCATM | BCT2 | PP18branched chain amino acid transaminase 219q13CV:PGCnp
GO_Annotation
6217RPS16S16ribosomal protein S1619q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
5050PAFAH1B3PAFAHGplatelet activating factor acetylhydrolase 1b catalytic subunit 319q13.1GO_Annotation
PMID:cooccur
84079ANKRD27PP12899 | VARPankyrin repeat domain 2719q13.11CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
9710KIAA0355-KIAA035519q13.11CV:PGCnp
DMG:Montano_2016
57655GRAMD1AKIAA1533GRAM domain containing 1A19q13.13CV:PGCnp
DMG:Wockner_2014
92799SHKBP1PP203 | Sb1SH3KBP1 binding protein 119q13.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
5296PIK3R2MPPH | MPPH1 | P85B | p85 | p85-BETAphosphoinositide-3-kinase regulatory subunit 219q13.2-q13.4CV:PGCnp
DMG:Wockner_2014
Network
5424POLD1CDC2 | CRCS10 | MDPL | POLDpolymerase (DNA) delta 1, catalytic subunit19q13.3CV:PGCnp
DMG:Wockner_2014
Expression
1209CLPTM1-cleft lip and palate associated transmembrane protein 119q13.3CV:PGCnp
DMG:Wockner_2014
6253RTN2NSP2 | NSPL1 | NSPLI | SPG12reticulon 219q13.32DMG:vanEijk_2014
339344MYPOPP42popMyb-related transcription factor, partner of profilin19q13.32CV:PGCnp
DMG:Wockner_2014
6193RPS5S5ribosomal protein S519q13.4CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
79143MBOAT7BB1 | LENG4 | LPIAT | LRC4 | MBOA7 | OACT7 | hMBOA-7membrane bound O-acyltransferase domain containing 719q13.4CV:PGCnp
DMG:Jaffe_2016
9040UBE2MUBC-RS2 | UBC12 | hUbc12ubiquitin conjugating enzyme E2 M19q13.43CV:PGCnp
DMG:Wockner_2014
653820FAM72Bp17family with sequence similarity 72 member B1p11.2DMG:Wockner_2014
GSMA_I
GSMA_IIA
5738PTGFRNCD315 | CD9P-1 | EWI-F | FPRP | SMAP-6prostaglandin F2 receptor inhibitor1p13.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
389RHOCARH9 | ARHC | H9 | RHOH9ras homolog family member C1p13.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
29899GPSM2CMCS | DFNB82 | LGN | PINSG-protein signaling modulator 21p13.3CV:PGCnp
DMG:Wockner_2014
Network
Potential synaptic genes
2730GCLMGLCLRglutamate-cysteine ligase modifier subunit1p22.1Association
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
1600DAB1-Dab, reelin signal transducer, homolog 1 (Drosophila)1p32-p31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
Network
PMID:cooccur
5792PTPRFBNAH2 | LARprotein tyrosine phosphatase, receptor type F1p34CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
57648KIAA1522-KIAA15221p35.1CV:PGCnp
51538ZCCHC17HSPC251 | PS1D | pNO40zinc finger CCHC-type containing 171p35.2CV:PGCnp
DMG:Wockner_2014
51102MECRCGI-63 | FASN2B | NRBF1mitochondrial trans-2-enoyl-CoA reductase1p35.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
11079RER1-retention in endoplasmic reticulum sorting receptor 11p36CV:PGCnp
1870E2F2E2F-2E2F transcription factor 21p36CV:GWASdb
DMG:Wockner_2014
1650DDOSTAGER1 | CDG1R | OKSWcl45 | OST | OST48 | WBP1dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit1p36.1DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
55920RCC2TD-60regulator of chromosome condensation 21p36.13CV:PGCnp
DMG:Wockner_2014
51107APH1A6530402N02Rik | APH-1 | APH-1A | CGI-78aph-1 homolog A, gamma secretase subunit1p36.13-q31.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
NEUROTROPHIN SIGNALING
22883CLSTN1ALC-ALPHA | CDHR12 | CST-1 | CSTN1 | PIK3CD | XB31alpha | alcalpha1 | alcalpha2calsyntenin 11p36.22CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
375790AGRNCMS8 | CMSPPDagrin1p36.33CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Darnell FMRP targets
4209MEF2D-myocyte enhancer factor 2D1q12-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
27173SLC39A1ZIP1 | ZIRTLsolute carrier family 39 member 11q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10712FAM189BC1orf2 | COTE1family with sequence similarity 189 member B1q21CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
405ARNTHIF-1-beta | HIF-1beta | HIF1-beta | HIF1B | HIF1BETA | TANGO | bHLHe2aryl hydrocarbon receptor nuclear translocator1q21CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
3570IL6RCD126 | IL-6R-1 | IL-6RA | IL6Q | IL6RA | IL6RQ | gp80interleukin 6 receptor1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
6281S100A1042C | ANX2L | ANX2LG | CAL1L | CLP11 | Ca[1] | GP11 | P11 | p10S100 calcium binding protein A101q21CV:PGCnp
DEG:Sanders_2013
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
1196CLK2-CDC like kinase 21q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
58497PRUNEDRES-17 | DRES17 | HTCD37prune exopolyphosphatase1q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
1942EFNA1B61 | ECKLG | EFL1 | EPLG1 | LERK-1 | LERK1 | TNFAIP4ephrin-A11q21-q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
4881NPR1ANPRA | ANPa | GUC2A | GUCY2A | NPRAnatriuretic peptide receptor 11q21-q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
23623RUSC1NESCARUN and SH3 domain containing 11q21-q22CV:PGCnp
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
5565PRKAB2-protein kinase AMP-activated non-catalytic subunit beta 21q21.1CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
8682PEA15HMAT1 | HUMMAT1H | MAT1 | MAT1H | PEA-15 | PEDphosphoprotein enriched in astrocytes 151q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
23381SMG5EST1B | LPTS-RP1 | LPTSRP1 | SMG-5SMG5 nonsense mediated mRNA decay factor1q21.2CV:PGCnp
GSMA_I
GSMA_IIA
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
10262SF3B4AFD1 | Hsh49 | SAP49 | SF3b49splicing factor 3b subunit 41q21.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
80308FLAD1FAD1 | FADS | PP591flavin adenine dinucleotide synthetase 11q21.3DMG:vanEijk_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
8751ADAM15MDC15ADAM metallopeptidase domain 151q21.3CV:PGCnp
GSMA_I
GSMA_IIA
81609SNX27MRT1 | MY014sorting nexin family member 271q21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
90780PYGO21190004M21Rikpygopus family PHD finger 21q21.3CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
55793FAM63A-family with sequence similarity 63 member A1q21.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
GSMA_IIA
23248RPRD2HSPC099 | KIAA0460regulation of nuclear pre-mRNA domain containing 21q21.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
55585UBE2Q1GTAP | NICE-5 | PRO3094 | UBE2Qubiquitin conjugating enzyme E2 Q11q21.3CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
2224FDPSFPPS | FPS | POROK9farnesyl diphosphate synthase1q22CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
55154MSTO1LST005 | MSTmisato 1, mitochondrial distribution and morphology regulator1q22CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
54856GON4LGON-4 | GON4 | YARPgon-4 like1q22CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Ascano FMRP targets
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
54499TMCO1HP10122 | PCIA3 | PNAS-136 | TMCC4transmembrane and coiled-coil domains 11q24.1CV:PGCnp
PMID:cooccur
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
9887SMG7C1orf16 | EST1C | SGA56MSMG7 nonsense mediated mRNA decay factor1q25CV:PGCnp
DMG:Jaffe_2016
7175TPR-translocated promoter region, nuclear basket protein1q25CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Ascano FMRP targets
9213XPR1IBGC6 | SYG1 | X3xenotropic and polytropic retrovirus receptor 11q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
27ABL2ABLL | ARGABL proto-oncogene 2, non-receptor tyrosine kinase1q25.2CV:PGCnp
DMG:Nishioka_2013
Network
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
4179CD46AHUS2 | MCP | MIC10 | TLX | TRA2.10CD46 molecule1q32CV:PGCnp
PMID:cooccur
55733HHATMART2 | SKI1 | Sknhedgehog acyltransferase1q32CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51377UCHL5CGI-70 | INO80R | UCH-L5 | UCH37ubiquitin C-terminal hydrolase L51q32CV:PGCnp
DMG:Jaffe_2016
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
5525PPP2R5AB56A | PR61Aprotein phosphatase 2 regulatory subunit B', alpha1q32.2-q32.3CV:PGCnp
DMG:Wockner_2014
25782RAB3GAP2RAB3-GAP150 | RAB3GAP150 | SPG69 | WARBM2 | p150RAB3 GTPase activating non-catalytic protein subunit 21q41CV:PGCnp
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
8443GNPATDAP-AT | DAPAT | DHAPAT | RCDP2glyceronephosphate O-acyltransferase1q42Association
CV:PGCnp
PMID:cooccur
CompositeSet
29097CNIH4CNIH-4 | HSPC163cornichon family AMPA receptor auxiliary protein 41q42.11CV:PGCnp
Expression
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
64746ACBD3GCP60 | GOCAP1 | GOLPH1 | PAP7acyl-CoA binding domain containing 31q42.12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
51742ARID4BBCAA | BRCAA1 | RBBP1L1 | RBP1L1 | SAP180AT-rich interaction domain 4B1q42.3CV:PGCnp
DMG:Wockner_2014
359948IRF2BP2-interferon regulatory factor 2 binding protein 21q42.3CV:PGCnp
DMG:Wockner_2014
955ENTPD6CD39L2 | IL-6SAG | IL6ST2 | NTPDase-6 | dJ738P15.3ectonucleoside triphosphate diphosphohydrolase 6 (putative)20p11.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Ascano FMRP targets
57506MAVSCARDIF | IPS-1 | IPS1 | VISAmitochondrial antiviral signaling protein20p13CV:PGCnp
Expression
8455ATRNDPPT-L | MGCAattractin20p13CV:PGCnp
PMID:cooccur
140809SRXN1C20orf139 | Npn3 | SRX | SRX1sulfiredoxin 120p13CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
140901STK35CLIK1 | STK35L1serine/threonine kinase 3520p13CV:PGCnp
DMG:Nishioka_2013
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
57446NDRG3-NDRG family member 320q11.21-q11.23CV:PGCnp
DMG:Jaffe_2016
11264PXMP4PMP24peroxisomal membrane protein 420q11.22CV:PGCnp
DMG:Nishioka_2013
5335PLCG1NCKAP3 | PLC-II | PLC1 | PLC148 | PLCgamma1phospholipase C gamma 120q12-q13.1CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
Potential synaptic genes
5476CTSAGLB2 | GSL | NGBE | PPCA | PPGBcathepsin A20q13.1DMG:Wockner_2014
GO_Annotation
128486FITM2C20orf142 | Fit2 | dJ881L22.2fat storage-inducing transmembrane protein 220q13.12CV:PGCnp
DMG:Jaffe_2016
Expression
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
10564ARFGEF2BIG2 | PVNH2 | dJ1164I10.1ADP ribosylation factor guanine nucleotide exchange factor 220q13.13CV:PGCnpAscano FMRP targets
81928CABLES2C20orf150 | dJ908M14.2 | ik3-2Cdk5 and Abl enzyme substrate 220q13.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
11083DIDO1BYE1 | C20orf158 | DATF-1 | DATF1 | DIDO2 | DIDO3 | DIO-1 | DIO1 | dJ885L7.8death inducer-obliterator 120q13.33CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
29980DONSONB17 | C21orf60downstream neighbor of SON21q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
PMID:cooccur
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
89781HPS4BLOC3S2 | LEHPS4, biogenesis of lysosomal organelles complex 3 subunit 222cen-q12.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
23119HIC2HRG22 | ZBTB30 | ZNF907hypermethylated in cancer 222q11.21CNV:YES
GSMA_I
79680C22orf29BOPchromosome 22 open reading frame 2922q11.21CNV:YES
CV:PGCnp
GSMA_I
8318CDC45CDC45L | CDC45L2 | PORC-PI-1cell division cycle 4522q11.21CNV:YES
CV:PGCnp
GSMA_I
9993DGCR2DGS-C | IDD | LAN | SEZ-12DiGeorge syndrome critical region gene 222q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
9647PPM1FCAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2protein phosphatase, Mg2+/Mn2+ dependent 1F22q11.22CV:GWASdb
CV:PGCnp
GSMA_I
150275CCDC117dJ366L4.1coiled-coil domain containing 11722q12.1CV:PGCnp
GSMA_I
23762OSBP2HLM | ORP-4 | ORP4 | OSBPL1 | OSBPL4oxysterol binding protein 222q12.2CV:PGCnp
GSMA_I
113791PIK3IP1HGFL | hHGFL(S)phosphoinositide-3-kinase interacting protein 122q12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8563THOC5C22orf19 | Fmip | PK1.3 | fSAP79THO complex 522q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
11015KDELR3ERD2L3KDEL endoplasmic reticulum protein retention receptor 322q13.1CV:PGCnp
DMG:Nishioka_2013
80115BAIAP2L2-BAI1 associated protein 2 like 222q13.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
79019CENPMC22orf18 | CENP-M | PANE1centromere protein M22q13.2CV:PGC128
CV:PGCnp
158ADSLAMPS | ASASE | ASLadenylosuccinate lyase22q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23542MAPK8IP2IB-2 | IB2 | JIP2 | PRKM8IPLmitogen-activated protein kinase 8 interacting protein 222q13.33Association
CV:PGCnp
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
822CAPGAFCP | HEL-S-66 | MCPcapping actin protein, gelsolin like2p11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
5967REG1AICRF | P19 | PSP | PSPS | PSPS1 | PTP | REGregenerating family member 1 alpha2p12CV:GWASdb
CV:PGCnp
64395GMCL1BTBD13 | GCL | GCL1 | SPATA29germ cell-less, spermatogenesis associated 12p13.3CV:PGCnp
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
10575CCT4CCT-DELTA | Cctd | SRBchaperonin containing TCP1 subunit 42p15CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
55704CCDC88AAPE | GIRDIN | GIV | GRDN | HkRP1 | KIAA1212coiled-coil domain containing 88A2p16.1CV:PGCnp
Network
PMID:cooccur
23433RHOQARHQ | HEL-S-42 | RASL7A | TC10 | TC10Aras homolog family member Q2p21CV:PGCnp
1788DNMT3ADNMT3A2 | M.HsaIIIA | TBRSDNA (cytosine-5-)-methyltransferase 3 alpha2p23CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
4613MYCNMODED | N-myc | NMYC | ODED | bHLHe37v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog2p24.3CV:PGCnp
DMG:Jaffe_2016
9448MAP4K4FLH21957 | HEL-S-31 | HGK | MEKKK4 | NIKmitogen-activated protein kinase kinase kinase kinase 42q11.2-q12CV:PGCnp
DMG:Nishioka_2013
DNM:Guipponi_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11320MGAT4AGNT-IV | GNT-IVA | GnT-4amannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A2q12CV:PGCnp
GSMA_I
PMID:cooccur
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
7247TSNBCLF-1 | C3PO | RCHF1 | REHF-1 | TBRBP | TRSLNtranslin2q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
83879CDCA7JPO1cell division cycle associated 72q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
29789OLA1DOC45 | GBP45 | GTBP9 | GTPBP9 | PTD004Obg-like ATPase 12q31.1CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
9330GTF3C3TFIIIC102 | TFIIICgamma | TFiiiC2-102general transcription factor IIIC subunit 32q33.1CV:PGCnpAscano FMRP targets
65062TMEM237ALS2CR4 | JBTS14transmembrane protein 2372q33.2CV:PGCnp
DMG:Jaffe_2016
3667IRS1HIRS-1insulin receptor substrate 12q36CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
2272FHITAP3Aase | FRA3Bfragile histidine triad3p14.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
Potential synaptic genes
54899PXKMONaKAPX domain containing serine/threonine kinase like3p14.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
51517NCKIPSDAF3P21 | DIP | DIP1 | ORF1 | SPIN90 | VIP54 | WASLBP | WISHNCK interacting protein with SH3 domain3p21CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1294COL7A1EBD1 | EBDCT | EBR1 | NDNC8collagen type VII alpha 13p21.1CV:PGCnp
29890RBM15BHUMAGCGB | OTT3RNA binding motif protein 15B3p21.2CV:GWASdb
CV:PGCnp
Ascano FMRP targets
65010SLC26A6-solute carrier family 26 member 63p21.3CV:PGCnp
GO_Annotation
9807IP6K1IHPK1 | PiUSinositol hexakisphosphate kinase 13p21.31CV:PGCnp
10293TRAIPRNF206 | SCKL9 | TRIPTRAF interacting protein3p21.31CV:PGCnp
10491CRTAPCASP | LEPREL3 | OI7 | P3H5cartilage associated protein3p22.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9779TBC1D5-TBC1 domain family member 53p24.3CV:GWASdb
CV:PGCnp
GSMA_I
5468PPARGCIMT1 | GLM1 | NR1C3 | PPARG1 | PPARG2 | PPARgammaperoxisome proliferator activated receptor gamma3p25CV:PGCnp
GSMA_I
PMID:cooccur
79885HDAC11HD11histone deacetylase 113p25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
56987BBXARTC1 | HBP2 | HSPC339 | MDS001bobby sox homolog (Drosophila)3q13.1CV:GWASdb
CV:PGCnp
CV:PheWAS
DEG:Zhao_2015
Expression
GSMA_IIA
GSMA_IIE
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
79718TBL1XR1C21 | DC42 | IRA1 | TBLR1transducin (beta)-like 1 X-linked receptor 13q26.32CV:GWASdb
CV:PGCnp
23527ACAP2CENTB2 | CNT-B2ArfGAP with coiled-coil, ankyrin repeat and PH domains 23q29CV:PGCnp
DMG:Jaffe_2016
200933FBXO45Fbx45F-box protein 453q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6286S100PMIG9S100 calcium binding protein P4p16CV:PGCnp
DMG:Jaffe_2016
57533TBC1D14-TBC1 domain family member 144p16.1CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
10608MXD4MAD4 | MST149 | MSTP149 | bHLHc12MAX dimerization protein 44p16.3CV:PGCnp
174AFPAFPD | FETA | HPAFPalpha fetoprotein4q13.3CV:PGCnp
PMID:cooccur
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
10098TSPAN5NET-4 | NET4 | TM4SF9 | TSPAN-5tetraspanin 54q23CV:PGCnp
DMG:Jaffe_2016
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
1047CLGN-calmegin4q28.3-q31.1DMG:Jaffe_2016
2549GAB1-GRB2 associated binding protein 14q31.21CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
9037SEMA5ASEMAF | semFsemaphorin 5A5p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7204TRIOARHGEF23 | tgattrio Rho guanine nucleotide exchange factor5p15.2CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
79888LPCAT1AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcatlysophosphatidylcholine acyltransferase 15p15.33CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
81037CLPTM1LCRR9CLPTM1-like5p15.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3673ITGA2BR | CD49B | GPIa | HPA-5 | VLA-2 | VLAA2integrin subunit alpha 25q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
Ascano FMRP targets
1022CDK7CAK1 | CDKN7 | HCAK | MO15 | STK1 | p39MO15cyclin-dependent kinase 75q12.1GO_Annotation
27292DIMT1DIM1 | DIMT1L | HSA9761 | HUSSY5DIM1 dimethyladenosine transferase 1 homolog5q12.1CV:PGCnp
DMG:Jaffe_2016
55789DEPDC1BBRCC3 | XTP1DEP domain containing 1B5q12.1CV:PGCnp
4131MAP1BFUTSCH | MAP5 | PPP1R102microtubule associated protein 1B5q13CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
8382NME5NM23-H5 | NM23H5 | RSPH23NME/NM23 family member 55q31CV:PGCnp
GSMA_I
91368CDKN2AIPNL-CDKN2A interacting protein N-terminal like5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
1836SLC26A2D5S1708 | DTD | DTDST | EDM4 | MST153 | MSTP157solute carrier family 26 member 25q32CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
5159PDGFRBCD140B | IBGC4 | IMF1 | JTK12 | KOGS | PDGFR | PDGFR-1 | PDGFR1 | PENTTplatelet derived growth factor receptor beta5q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
206358SLC36A1Dct1 | LYAAT1 | PAT1 | TRAMD3solute carrier family 36 member 15q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
23367LARP1LARPLa ribonucleoprotein domain family member 15q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
79685SAP30LNS4ATP2SAP30-like5q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
821CANXCNX | IP90 | P90calnexin5q35CV:PGCnp
DNM:Xu_2012
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
CompositeSet
4869NPM1B23 | NPMnucleophosmin (nucleolar phosphoprotein B23, numatrin)5q35.1CV:PGCnp
GSMA_IIA
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
8614STC2STC-2 | STCRPstanniocalcin 25q35.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
10814CPLX2921-L | CPX-2 | CPX2 | Hfb1complexin 25q35.2Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
55651NHP2DKCB2 | NHP2P | NOLA2NHP2 ribonucleoprotein5q35.3CV:PGCnp
DMG:Wockner_2014
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
26036ZNF451COASTER | dJ417I1.1zinc finger protein 4516p12.1CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
9532BAG2BAG-2 | dJ417I1.2BCL2 associated athanogene 26p12.1-p11.2CV:PGCnp
DMG:Wockner_2014
Expression
G2Cdb.humanPSD
G2Cdb.humanPSP
3159HMGA1HMG-R | HMGA1A | HMGIYhigh mobility group AT-hook 16p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
57510XPO5exp5exportin 56p21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
2030SLC29A1ENT1solute carrier family 29 member 16p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
4439MSH5G7 | MUTSH5 | NG23mutS homolog 56p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
4800NFYACBF-A | CBF-B | HAP2 | NF-YAnuclear transcription factor Y subunit alpha6p21.3CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
26212OR2B6OR2B1 | OR2B1P | OR2B5 | OR2B6P | OR5-40 | OR5-41 | OR6-31 | dJ408B20.2olfactory receptor family 2 subfamily B member 66p21.3CV:PGCnp
GSMA_I
10471PFDN6H2-KE2 | HKE2 | KE-2 | PFD6prefoldin subunit 66p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7407VARSG7A | VARS1 | VARS2valyl-tRNA synthetase6p21.3CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
1460CSNK2BCK2B | CK2N | CSK2B | G5Acasein kinase 2 beta6p21.3CV:PGCnp
GSMA_I
Network
INTRACELLULAR SIGNAL TRANSDUCTION
3017HIST1H2BDH2B.1B | H2B/b | H2BFB | HIRIP2 | dJ221C16.6histone cluster 1, H2bd6p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
10537UBDFAT10 | GABBR1 | UBD-3ubiquitin D6p21.3CV:PGCnp
PMID:cooccur
578BAK1BAK | BAK-LIKE | BCL2L7 | CDN1BCL2 antagonist/killer 16p21.3Association
CV:PGCnp
GSMA_I
9374PPT2C6orf8 | G14 | PPT-2palmitoyl-protein thioesterase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
4758NEU1NANH | NEU | SIAL1neuraminidase 1 (lysosomal sialidase)6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10919EHMT2BAT8 | C6orf30 | G9A | GAT8 | KMT1C | NG36euchromatic histone-lysine N-methyltransferase 26p21.31CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
51596CUTAACHAP | C6orf82cutA divalent cation tolerance homolog (E. coli)6p21.32CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
23ABCF1ABC27 | ABC50ATP binding cassette subfamily F member 16p21.33CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
11270NRMNRM29nurim (nuclear envelope membrane protein)6p21.33CV:PGCnp
DMG:Wockner_2014
GSMA_I
221545C6orf136-chromosome 6 open reading frame 1366p21.33CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GSMA_I
203068TUBBCDCBM6 | CSCSC1 | M40 | OK/SW-cl.56 | TUBB1 | TUBB5tubulin beta class I6p21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
Network
STRUCTURAL PLASTICITY
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
1871E2F3E2F-3E2F transcription factor 36p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10385BTN2A2BT2.2 | BTF2 | BTN2.2butyrophilin subfamily 2 member A26p22.1CV:GWASdb
CV:PGCnp
GSMA_I
79692ZNF322HCG12 | ZNF322A | ZNF388 | ZNF489zinc finger protein 3226p22.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
11120BTN2A1BK14H9.1 | BT2.1 | BTF1 | BTN2.1 | DJ3E1.1butyrophilin subfamily 2 member A16p22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
Ascano FMRP targets
8334HIST1H2ACH2A/l | H2AFL | dJ221C16.4histone cluster 1, H2ac6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8347HIST1H2BCH2B.1 | H2B/l | H2BFL | dJ221C16.3histone cluster 1, H2bc6p22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
51567TDP2AD022 | EAP2 | EAPII | TTRAP | dJ30M3.3 | hTDP2tyrosyl-DNA phosphodiesterase 26p22.3-p22.1CV:PGCnp
GSMA_I
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
63027SLC22A23C6orf85solute carrier family 22 member 236p25.2CV:GWAScat
CV:PGCnp
DNM:Guipponi_2014
PMID:cooccur
2162F13A1F13Acoagulation factor XIII A chain6p25.3-p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
58528RRAGDRAGD | bA11D8.2.1Ras related GTP binding D6q15CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
28962OSTM1GIPN | GL | HSPC019 | OPTB5osteopetrosis associated transmembrane protein 16q21CV:GWAScat
CV:GWASdb
CV:PGCnp
387103CENPWC6orf173 | CENP-W | CUG2centromere protein W6q22.32CV:PGCnp
DMG:Jaffe_2016
84918LRP11MANSC3 | bA350J20.3LDL receptor related protein 116q25.1CV:PGCnp
DMG:Jaffe_2016
79683ZDHHC14NEW1CPzinc finger DHHC-type containing 146q25.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
5723PSPHPSP | PSPHDphosphoserine phosphatase7p11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
3181HNRNPA2B1HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1heterogeneous nuclear ribonucleoprotein A2/B17p15CV:PGCnp
10652YKT6-YKT6 v-SNARE homolog (S. cerevisiae)7p15.1CV:PGCnp
GO_Annotation
10124ARL4AARL4ADP ribosylation factor like GTPase 4A7p21.3CV:PGCnp
2115ETV1ER81ETS variant 17p21.3CV:PGCnp
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
80727TTYH3-tweety family member 37p22CV:PGCnpION BALANCE
CompositeSet
Darnell FMRP targets
2768GNA12NNX3 | RMP | gepG protein subunit alpha 127p22.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G-PROTEIN RELAY
Ascano FMRP targets
23089PEG10EDR | HB-1 | MEF3L | Mar2 | Mart2 | RGAG3paternally expressed 107q21CV:PGCnp
DMG:Nishioka_2013
54467ANKIB1-ankyrin repeat and IBR domain containing 17q21.2CV:PGCnp
55971BAIAP2L1IRTKSBAI1 associated protein 2 like 17q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
1174AP1S1AP19 | CLAPS1 | EKV3 | MEDNIK | SIGMA1Aadaptor related protein complex 1 sigma 1 subunit7q22.1CV:PGCnpCompositeSet
5420PODXLGp200 | PC | PCLP | PCLP-1podocalyxin like7q32-q33CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
254048UBN2-ubinuclein 27q34CV:PGCnp
Expression
28996HIPK2PRO0593homeodomain interacting protein kinase 27q34CV:PGCnpCompositeSet
Darnell FMRP targets
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
10922FASTKFASTFas activated serine/threonine kinase7q35CV:PGCnp
DMG:Nishioka_2013
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
54892NCAPG2CAP-G2 | CAPG2 | LUZP5 | MTB | hCAP-G2non-SMC condensin II complex subunit G27q36.3CV:PGCnp
DMG:Wockner_2014
10947AP3M2AP47B | CLA20 | P47Badaptor related protein complex 3 mu 2 subunit8p11.2CV:PGCnp
DMG:Jaffe_2016
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
80223RAB11FIP1NOEL1A | RCP | rab11-FIP1RAB11 family interacting protein 1 (class I)8p11.22CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
23039XPO7EXP7 | RANBP16exportin 78p21CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
2137EXTL3BOTV | EXTL1L | EXTR1 | REGR | RPRexostosin like glycosyltransferase 38p21CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
157570ESCO22410004I17Rik | EFO2 | RBSestablishment of sister chromatid cohesion N-acetyltransferase 28p21.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
9788MTSS1MIM | MIMA | MIMBmetastasis suppressor 18p22CV:GWASdb
CV:PGCnp
GO_Annotation
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
5591PRKDCDNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350protein kinase, DNA-activated, catalytic polypeptide8q11CV:PGCnp
DMG:vanEijk_2014
DNM:McCarthy_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
6917TCEA1GTF2S | SII | TCEA | TF2S | TFIIStranscription elongation factor A18q11.2CV:PGCnp
DMG:Jaffe_2016
51606ATP6V1HCGI-11 | MSTP042 | NBP1 | SFD | SFDalpha | SFDbeta | VMA13ATPase H+ transporting V1 subunit H8q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
137886UBXN2Bp37UBX domain protein 2B8q12.1CV:PGCnp
157807CLVS1CRALBPL | RLBP1L1clavesin 18q12.3CV:PGCnp
CV:PheWAS
5828PEX2PAF1 | PBD5A | PBD5B | PMP3 | PMP35 | PXMP3 | RNF72 | ZWS3peroxisomal biogenesis factor 28q21.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
2171FABP5E-FABP | EFABP | KFABP | PA-FABP | PAFABPfatty acid binding protein 58q21.13CV:GWASdb
CV:PGCnp
Expression
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
6156RPL30L30ribosomal protein L308q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
51366UBR5DD5 | EDD | EDD1 | HYDubiquitin protein ligase E3 component n-recognin 58q22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7381UQCRBMC3DN3 | QCR7 | QP-C | QPC | UQBC | UQBP | UQCR6 | UQPCubiquinol-cytochrome c reductase binding protein8q22CV:PGCnp
DMG:Wockner_2014
Expression
3646EIF3EEIF3-P48 | EIF3S6 | INT6 | eIF3-p46eukaryotic translation initiation factor 3 subunit E8q22-q23CV:PGCnp
DMG:Jaffe_2016
Network
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
55656INTS8C8orf52 | INT8integrator complex subunit 88q22.1CV:PGCnp
DMG:Wockner_2014
389677RBM12BMGC:33837RNA binding motif protein 12B8q22.1DMG:Jaffe_2016
51123ZNF706HSPC038 | PNAS-106 | PNAS-113zinc finger protein 7068q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
7534YWHAZ14-3-3-zeta | HEL-S-3 | HEL-S-93 | HEL4 | KCIP-1 | YWHADtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta8q23.1Association
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
5168ENPP2ATX | ATX-X | AUTOTAXIN | LysoPLD | NPP2 | PD-IALPHA | PDNP2ectonucleotide pyrophosphatase/phosphodiesterase 28q24.1CV:PGCnp
PMID:cooccur
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
50807ASAP1AMAP1 | CENTB4 | DDEF1 | PAG2 | PAP | ZG14PArfGAP with SH3 domain, ankyrin repeat and PH domain 18q24.1-q24.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
157378TMEM65-transmembrane protein 658q24.13CV:GWASdb
CV:PGCnp
9897KIAA0196RTSC | RTSC1 | SPG8KIAA01968q24.13CV:PGCnp
51571FAM49BBM-009 | L1family with sequence similarity 49 member B8q24.21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5747PTK2FADK | FAK | FAK1 | FRNK | PPP1R71 | p125FAK | pp125FAKprotein tyrosine kinase 28q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
286077FAM83HAI3family with sequence similarity 83 member H8q24.3CV:PGCnp
80728ARHGAP39CrGAP | VilseRho GTPase activating protein 398q24.3CV:PGCnp
DMG:Jaffe_2016
INTRACELLULAR SIGNAL TRANSDUCTION
10397NDRG1CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5N-myc downstream regulated 18q24.3CV:PGCnp
DEG:Zhao_2015
Network
2907GRINAHNRGW | LFG1 | NMDARA1 | TMBIM3glutamate ionotropic receptor NMDA type subunit associated protein 18q24.3PMID:cooccur
22827PUF60FIR | RoBPI | SIAHBP1 | VRJSpoly(U) binding splicing factor 60KDa8q24.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
81858SHARPINSIPL1SHANK associated RH domain interactor8q24.3DNM:Guipponi_2014G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
84232MAF1-MAF1 homolog, negative regulator of RNA polymerase III8q24.3DMG:Jaffe_2016
1537CYC1MC3DN6 | UQCR4cytochrome c18q24.3DMG:vanEijk_2014
DMG:Wockner_2014
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
2189FANCGFAG | XRCC9Fanconi anemia complementation group G9p13CV:PGCnp
DMG:Jaffe_2016
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur
79956ERMP1FXNA | KIAA1815 | bA207C16.3endoplasmic reticulum metallopeptidase 19p24CV:PGCnp
DMG:Jaffe_2016
3376IARSIARS1 | ILERS | ILRS | IRS | PRO0785isoleucyl-tRNA synthetase9q21CV:PGCnp
1306COL15A1-collagen type XV alpha 19q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
79095C9orf16EST00098chromosome 9 open reading frame 169q34.1CV:PGCnp
54662TBC1D13-TBC1 domain family member 139q34.11CV:PGCnp
7076TIMP1CLGI | EPA | EPO | HCI | TIMP | TIMP-1TIMP metallopeptidase inhibitor 1Xp11.3-p11.23CV:PGCnp
PMID:cooccur
Potential synaptic genes
8473OGTHINCUT-1 | HRNT1 | O-GLCNACO-linked N-acetylglucosamine (GlcNAc) transferaseXq13Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
Potential synaptic genes
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2717GLAGALAgalactosidase alphaXq22GO_Annotation
PMID:cooccur
5716PSMD10dJ889N15.2 | p28 | p28(GANK)proteasome 26S subunit, non-ATPase 10Xq22.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
10134BCAP316C6-AG | BAP31 | CDM | DDCH | DXS1357EB-cell receptor-associated protein 31Xq28CV:GWASdb
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
Potential synaptic genes
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes